PDB entry 2a6d

View 2a6d on RCSB PDB site
Description: Crystal structure analysis of the anti-arsonate germline antibody 36-65 in complex with a phage display derived dodecapeptide RLLIADPPSPRE
Class: immune system
Keywords: Germline, FAB, ANTIBODY
Deposited on 2005-07-02, released 2006-06-13
The last revision prior to the SCOP 1.75 freeze date was dated 2006-06-13, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: 0.23
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Germline antibody 36-65 Fab light chain
    Species: Mus musculus
  • Chain 'B':
    Compound: Germline antibody 36-65 Fab heavy chain
    Species: MUS MUSCULUS
    Domains in SCOP 1.75: d2a6db1
  • Chain 'H':
    Compound: Germline antibody 36-65 Fab heavy chain
    Species: MUS MUSCULUS
    Domains in SCOP 1.75: d2a6dh1
  • Chain 'L':
    Compound: Germline antibody 36-65 Fab light chain
    Species: Mus musculus
  • Chain 'P':
    Compound: Dodecapeptide, RLLIADPPSPRE
    Species: synthetic, synthetic
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2a6dB (B:)
evqlqqsgaelvragssvkmsckasgytftsyginwvkqrpgqglewigyinpgngytky
nekfkgkttltvdkssstaymqlrsltsedsavyfcarsvyyggsyyfdywgqgttltvs
sakttppsvyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqs
dlytlsssvtvpssprpsetvtcnvahpasstkvdkkivprd

    Sequence, based on observed residues (ATOM records): (download) 
    >2a6dB (B:)
evqlqqsgaelvragssvkmsckasgytftsyginwvkqrpgqglewigyinpgngytky
nekfkgkttltvdkssstaymqlrsltsedsavyfcarsvyyggsyyfdywgqgttltvs
sakttppsvyplapgstnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdly
tlsssvtvpssprpsetvtcnvahpasstkvdkkivprd

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >2a6dH (H:)
evqlqqsgaelvragssvkmsckasgytftsyginwvkqrpgqglewigyinpgngytky
nekfkgkttltvdkssstaymqlrsltsedsavyfcarsvyyggsyyfdywgqgttltvs
sakttppsvyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqs
dlytlsssvtvpssprpsetvtcnvahpasstkvdkkivprd

    Sequence, based on observed residues (ATOM records): (download) 
    >2a6dH (H:)
evqlqqsgaelvragssvkmsckasgytftsyginwvkqrpgqglewigyinpgngytky
nekfkgkttltvdkssstaymqlrsltsedsavyfcarsvyyggsyyfdywgqgttltvs
sakttppsvyplapgsnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdlyt
lsssvtvpssprpsetvtcnvahpasstkvdkkivprd

  • Chain 'L':
    No sequence available.

  • Chain 'P':
    No sequence available.