PDB entry 1zvv

View 1zvv on RCSB PDB site
Description: Crystal structure of a ccpa-crh-dna complex
Class: transcription/DNA
Keywords: ccpa; crh; dna; complex; lacI member
Deposited on 2005-06-02, released 2006-02-07
The last revision prior to the SCOP 1.75 freeze date was dated 2006-10-24, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2.98 Å
R-factor: 0.235
AEROSPACI score: 0.16 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Glucose-resistance amylase regulator
    Species: Bacillus subtilis
    Gene: ccpA
    Database cross-references and differences (RAF-indexed):
    • Uniprot P46828 (0-331)
      • conflict (86)
      • conflict (104)
      • conflict (319)
    Domains in SCOP 1.75: d1zvva1, d1zvva2
  • Chain 'B':
    Compound: Glucose-resistance amylase regulator
    Species: Bacillus subtilis
    Gene: ccpA
    Database cross-references and differences (RAF-indexed):
    • Uniprot P46828 (0-331)
      • conflict (86)
      • conflict (104)
      • conflict (319)
    Domains in SCOP 1.75: d1zvvb1, d1zvvb2
  • Chain 'G':
    Compound: Glucose-resistance amylase regulator
    Species: Bacillus subtilis
    Gene: ccpA
    Database cross-references and differences (RAF-indexed):
    • Uniprot P46828 (0-331)
      • conflict (86)
      • conflict (104)
      • conflict (319)
    Domains in SCOP 1.75: d1zvvg1, d1zvvg2
  • Chain 'J':
    Compound: HPr-like protein crh
    Species: Bacillus subtilis
    Gene: crh
    Database cross-references and differences (RAF-indexed):
    • Uniprot O06976 (0-End)
      • conflict (32)
      • modified residue (45)
      • conflict (54)
      • conflict (60)
    Domains in SCOP 1.75: d1zvvj1
  • Chain 'O':
    Compound: DNA recognition strand CRE
  • Chain 'P':
    Compound: HPr-like protein crh
    Species: Bacillus subtilis
    Gene: crh
    Database cross-references and differences (RAF-indexed):
    • Uniprot O06976 (0-End)
      • conflict (32)
      • modified residue (45)
      • conflict (54)
      • conflict (60)
    Domains in SCOP 1.75: d1zvvp1
  • Chain 'R':
    Compound: DNA recognition strand CRE
  • Chain 'T':
    Compound: DNA recognition strand CRE
  • Chain 'W':
    Compound: HPr-like protein crh
    Species: Bacillus subtilis
    Gene: crh
    Database cross-references and differences (RAF-indexed):
    • Uniprot O06976 (0-End)
      • conflict (32)
      • modified residue (45)
      • conflict (54)
      • conflict (60)
    Domains in SCOP 1.75: d1zvvw1
  • Heterogens: IOD, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1zvvA (A:)
mnvtiydvareasvsmatvsrvvngnpnvkpstrkkvletierlgyrpnavarglaskkt
ttvgviipdisnifyaelargiediasmykyniilsnsdqnqdkqlhllnnmlgkqvdgi
ifmsgnvteehveelkkspvpvvlaasiestnqipsvtidyeqaafdavqslidsghkni
afvsgtleepinhakkvkgykraltesglpvrdsyivegdytydsgieaveklleedekp
taifvgtdemalgvihgaqdrglnvpndleiigfdntrlstmvrpqltsvvqpmydigav
amrlltkymnketvdssivelphriefrqstk

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1zvvB (B:)
mnvtiydvareasvsmatvsrvvngnpnvkpstrkkvletierlgyrpnavarglaskkt
ttvgviipdisnifyaelargiediasmykyniilsnsdqnqdkqlhllnnmlgkqvdgi
ifmsgnvteehveelkkspvpvvlaasiestnqipsvtidyeqaafdavqslidsghkni
afvsgtleepinhakkvkgykraltesglpvrdsyivegdytydsgieaveklleedekp
taifvgtdemalgvihgaqdrglnvpndleiigfdntrlstmvrpqltsvvqpmydigav
amrlltkymnketvdssivelphriefrqstk

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >1zvvG (G:)
mnvtiydvareasvsmatvsrvvngnpnvkpstrkkvletierlgyrpnavarglaskkt
ttvgviipdisnifyaelargiediasmykyniilsnsdqnqdkqlhllnnmlgkqvdgi
ifmsgnvteehveelkkspvpvvlaasiestnqipsvtidyeqaafdavqslidsghkni
afvsgtleepinhakkvkgykraltesglpvrdsyivegdytydsgieaveklleedekp
taifvgtdemalgvihgaqdrglnvpndleiigfdntrlstmvrpqltsvvqpmydigav
amrlltkymnketvdssivelphriefrqstk

    Sequence, based on observed residues (ATOM records): (download) 
    >1zvvG (G:)
mnvtiydvareasvsmatvsrvvngnpnvkpstrkkvletieyrpnavarglaskktttv
gviipdisnifyaelargiediasmykyniilsnsdqnqdkqlhllnnmlgkqvdgiifm
sgnvteehveelkkspvpvvlaasiestnqipsvtidyeqaafdavqslidsghkniafv
sgtleepinhakkvkgykraltesglpvrdsyivegdytydsgieaveklleedekptai
fvgtdemalgvihgaqdrglnvpndleiigfdntrlstmvrpqltsvvqpmydigavamr
lltkymnketvdssivelphriefrqstk

  • Chain 'J':
    Sequence, based on SEQRES records: (download) 
    >1zvvJ (J:)
mvqqkvevrlktglqarpaalfvqeanrftsdiflekdgkkvnaksimglmslaistgte
itliaqgedeqealeklaayvqeev

    Sequence, based on observed residues (ATOM records): (download) 
    >1zvvJ (J:)
mvqqkvevrlktglqarpaalfvqeanrftsdiflekdgkkvnaksimglmslaistgte
itliaqgedeqealeklaayvqee

  • Chain 'O':
    No sequence available.

  • Chain 'P':
    Sequence, based on SEQRES records: (download) 
    >1zvvP (P:)
mvqqkvevrlktglqarpaalfvqeanrftsdiflekdgkkvnaksimglmslaistgte
itliaqgedeqealeklaayvqeev

    Sequence, based on observed residues (ATOM records): (download) 
    >1zvvP (P:)
mvqqkvevrlktglqarpaalfvqeanrftsdiflekdgkkvnaksimglmslaistgte
itliaqgedeqealeklaayvqee

  • Chain 'R':
    No sequence available.

  • Chain 'T':
    No sequence available.

  • Chain 'W':
    Sequence, based on SEQRES records: (download) 
    >1zvvW (W:)
mvqqkvevrlktglqarpaalfvqeanrftsdiflekdgkkvnaksimglmslaistgte
itliaqgedeqealeklaayvqeev

    Sequence, based on observed residues (ATOM records): (download) 
    >1zvvW (W:)
mvqqkvevrlktglqarpaalfvqeanrftsdiflekdgkkvnaksimglmslaistgte
itliaqgedeqealeklaayvqee