PDB entry 1zs8

View 1zs8 on RCSB PDB site
Description: Crystal Structure of the Murine MHC Class Ib Molecule M10.5
Class: immune system
Keywords: major histocompatibility complex, MHC, vomeronasal organ, VNO, V2R receptors, pheromone receptors, beta-2-microglobulin, peptides
Deposited on 2005-07-22, released 2005-07-26
The last revision prior to the SCOP 1.73 freeze date was dated 2005-07-26, with a file datestamp of 2007-06-28.
Experiment type: XRAY
Resolution: 3 Å
R-factor: 0.307
AEROSPACI score: 0.14 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: histocompatibility 2, M region locus 10.5
    Species: MUS MUSCULUS
    Gene: M10.5
    Database cross-references and differences (RAF-indexed):
    • GB NP_808302 (0-273)
  • Chain 'B':
    Compound: Beta-2-microglobulin
    Species: HOMO SAPIENS
    Gene: B2M
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1zs8b1
  • Chain 'C':
    Compound: histocompatibility 2, M region locus 10.5
    Species: MUS MUSCULUS
    Gene: M10.5
    Database cross-references and differences (RAF-indexed):
    • GB NP_808302 (0-273)
  • Chain 'D':
    Compound: Beta-2-microglobulin
    Species: HOMO SAPIENS
    Gene: B2M
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1zs8d1
  • Chain 'E':
    Compound: histocompatibility 2, M region locus 10.5
    Species: MUS MUSCULUS
    Gene: M10.5
    Database cross-references and differences (RAF-indexed):
    • GB NP_808302 (0-273)
  • Chain 'F':
    Compound: Beta-2-microglobulin
    Species: HOMO SAPIENS
    Gene: B2M
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1zs8f1
  • Chain 'G':
    Compound: histocompatibility 2, M region locus 10.5
    Species: MUS MUSCULUS
    Gene: M10.5
    Database cross-references and differences (RAF-indexed):
    • GB NP_808302 (0-273)
  • Chain 'H':
    Compound: Beta-2-microglobulin
    Species: HOMO SAPIENS
    Gene: B2M
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1zs8h1
  • Chain 'I':
    Compound: histocompatibility 2, M region locus 10.5
    Species: MUS MUSCULUS
    Gene: M10.5
    Database cross-references and differences (RAF-indexed):
    • GB NP_808302 (0-273)
  • Chain 'J':
    Compound: Beta-2-microglobulin
    Species: HOMO SAPIENS
    Gene: B2M
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1zs8j1
  • Heterogens: NAG

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1zs8B (B:)
iqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskdw
sfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdm

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1zs8D (D:)
iqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskdw
sfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdm

  • Chain 'E':
    No sequence available.

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1zs8F (F:)
iqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskdw
sfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdm

  • Chain 'G':
    No sequence available.

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1zs8H (H:)
iqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskdw
sfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdm

  • Chain 'I':
    No sequence available.

  • Chain 'J':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1zs8J (J:)
iqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskdw
sfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdm