PDB entry 1zq3

View 1zq3 on RCSB PDB site
Description: NMR Solution Structure of the Bicoid Homeodomain Bound to the Consensus DNA Binding Site TAATCC
Class: transcription/DNA
Keywords: protein-DNA complex, double helix, helix-turn-helix, homeodomain, DNA-binding domain, k50, recognition helix, transcription factor, translational control, transcription/DNA complex
Deposited on 2005-05-18, released 2006-02-14
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: NMR
Resolution: N/A
R-factor: N/A
AEROSPACI score: 0.03 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 5'-d(*gp*cp*tp*cp*tp*ap*ap*tp*cp*cp*cp*cp*g)-3'
  • Chain 'B':
    Compound: 5'-d(*cp*gp*gp*gp*gp*ap*tp*tp*ap*gp*ap*gp*c)-3'
  • Chain 'P':
    Compound: Homeotic bicoid protein
    Species: Drosophila melanogaster [TaxId:7227]
    Gene: bcd
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9UAM0 (1-67)
      • cloning artifact (0)
    Domains in SCOPe 2.08: d1zq3p1, d1zq3p2

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    No sequence available.

  • Chain 'P':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1zq3P (P:)
    gprrtrttftssqiaeleqhflqgryltaprladlsaklalgtaqvkiwfknrrrrhkiq
    sdqhkdqs