PDB entry 1zof

View 1zof on RCSB PDB site
Description: Crystal structure of alkyl hydroperoxide-reductase (AhpC) from Helicobacter Pylori
Class: oxidoreductase
Keywords: decamer, toroide-shaped complex, OXIDOREDUCTASE
Deposited on 2005-05-13, released 2005-11-29
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.95 Å
R-factor: 0.236
AEROSPACI score: 0.19 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: alkyl hydroperoxide-reductase
    Species: Helicobacter pylori [TaxId:210]
    Gene: tsaA
    Database cross-references and differences (RAF-indexed):
    • Uniprot P56876 (0-End)
      • engineered (1)
    Domains in SCOPe 2.08: d1zofa1
  • Chain 'B':
    Compound: alkyl hydroperoxide-reductase
    Species: Helicobacter pylori [TaxId:210]
    Gene: tsaA
    Database cross-references and differences (RAF-indexed):
    • Uniprot P56876 (0-End)
      • engineered (1)
    Domains in SCOPe 2.08: d1zofb_
  • Chain 'C':
    Compound: alkyl hydroperoxide-reductase
    Species: Helicobacter pylori [TaxId:210]
    Gene: tsaA
    Database cross-references and differences (RAF-indexed):
    • Uniprot P56876 (0-End)
      • engineered (1)
    Domains in SCOPe 2.08: d1zofc_
  • Chain 'D':
    Compound: alkyl hydroperoxide-reductase
    Species: Helicobacter pylori [TaxId:210]
    Gene: tsaA
    Database cross-references and differences (RAF-indexed):
    • Uniprot P56876 (0-End)
      • engineered (1)
    Domains in SCOPe 2.08: d1zofd_
  • Chain 'E':
    Compound: alkyl hydroperoxide-reductase
    Species: Helicobacter pylori [TaxId:210]
    Gene: tsaA
    Database cross-references and differences (RAF-indexed):
    • Uniprot P56876 (0-End)
      • engineered (1)
    Domains in SCOPe 2.08: d1zofe_
  • Chain 'F':
    Compound: alkyl hydroperoxide-reductase
    Species: Helicobacter pylori [TaxId:210]
    Gene: tsaA
    Database cross-references and differences (RAF-indexed):
    • Uniprot P56876 (0-End)
      • engineered (1)
    Domains in SCOPe 2.08: d1zoff_
  • Chain 'G':
    Compound: alkyl hydroperoxide-reductase
    Species: Helicobacter pylori [TaxId:210]
    Gene: tsaA
    Database cross-references and differences (RAF-indexed):
    • Uniprot P56876 (0-End)
      • engineered (1)
    Domains in SCOPe 2.08: d1zofg_
  • Chain 'H':
    Compound: alkyl hydroperoxide-reductase
    Species: Helicobacter pylori [TaxId:210]
    Gene: tsaA
    Database cross-references and differences (RAF-indexed):
    • Uniprot P56876 (0-End)
      • engineered (1)
    Domains in SCOPe 2.08: d1zofh_
  • Chain 'I':
    Compound: alkyl hydroperoxide-reductase
    Species: Helicobacter pylori [TaxId:210]
    Gene: tsaA
    Database cross-references and differences (RAF-indexed):
    • Uniprot P56876 (0-End)
      • engineered (1)
    Domains in SCOPe 2.08: d1zofi_
  • Chain 'J':
    Compound: alkyl hydroperoxide-reductase
    Species: Helicobacter pylori [TaxId:210]
    Gene: tsaA
    Database cross-references and differences (RAF-indexed):
    • Uniprot P56876 (0-End)
      • engineered (1)
    Domains in SCOPe 2.08: d1zofj_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1zofA (A:)
    mvvtklapdfkapavlgnnevdehfelsknlgkngvilffwpkdftfvcpteiiafdkrv
    kdfhekgfnvigvsidseqvhfawkntpvekggigqvsfpmvaditksisrdydvlfeea
    ialrgaflidknmkvrhavindlplgrnademlrmvdallhfeehgevcpagwrkgdkgm
    kathqgvaeylkensikl
    

    Sequence, based on observed residues (ATOM records): (download)
    >1zofA (A:)
    mvvtklapdfkapavlgnnevdehfelsknlgkngvilffwpkdftfvcpteiiafdkrv
    kdfhekgfnvigvsidseqvhfawkntpvekggigqvsfpmvaditksisrdydvlfeea
    ialrgaflidknmkvrhavindlplgrnademlrmvdallhfeehgevcp
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >1zofB (B:)
    mvvtklapdfkapavlgnnevdehfelsknlgkngvilffwpkdftfvcpteiiafdkrv
    kdfhekgfnvigvsidseqvhfawkntpvekggigqvsfpmvaditksisrdydvlfeea
    ialrgaflidknmkvrhavindlplgrnademlrmvdallhfeehgevcpagwrkgdkgm
    kathqgvaeylkensikl
    

    Sequence, based on observed residues (ATOM records): (download)
    >1zofB (B:)
    mvvtklapdfkapavlgnnevdehfelsknlgkngvilffwpkdftfvcpteiiafdkrv
    kdfhekgfnvigvsidseqvhfawkntpvekggigqvsfpmvaditksisrdydvlfeea
    ialrgaflidknmkvrhavindlplgrnademlrmvdallhfeehgevcpagwrk
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >1zofC (C:)
    mvvtklapdfkapavlgnnevdehfelsknlgkngvilffwpkdftfvcpteiiafdkrv
    kdfhekgfnvigvsidseqvhfawkntpvekggigqvsfpmvaditksisrdydvlfeea
    ialrgaflidknmkvrhavindlplgrnademlrmvdallhfeehgevcpagwrkgdkgm
    kathqgvaeylkensikl
    

    Sequence, based on observed residues (ATOM records): (download)
    >1zofC (C:)
    mvvtklapdfkapavlgnnevdehfelsknlgkngvilffwpkdftfvcpteiiafdkrv
    kdfhekgfnvigvsidseqvhfawkntpvekggigqvsfpmvaditksisrdydvlfeea
    ialrgaflidknmkvrhavindlplgrnademlrmvdallhfeehgevcp
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >1zofD (D:)
    mvvtklapdfkapavlgnnevdehfelsknlgkngvilffwpkdftfvcpteiiafdkrv
    kdfhekgfnvigvsidseqvhfawkntpvekggigqvsfpmvaditksisrdydvlfeea
    ialrgaflidknmkvrhavindlplgrnademlrmvdallhfeehgevcpagwrkgdkgm
    kathqgvaeylkensikl
    

    Sequence, based on observed residues (ATOM records): (download)
    >1zofD (D:)
    mvvtklapdfkapavlgnnevdehfelsknlgkngvilffwpkdftfvcpteiiafdkrv
    kdfhekgfnvigvsidseqvhfawkntpvekggigqvsfpmvaditksisrdydvlfeea
    ialrgaflidknmkvrhavindlplgrnademlrmvdallhfeehgevcpagwrk
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >1zofE (E:)
    mvvtklapdfkapavlgnnevdehfelsknlgkngvilffwpkdftfvcpteiiafdkrv
    kdfhekgfnvigvsidseqvhfawkntpvekggigqvsfpmvaditksisrdydvlfeea
    ialrgaflidknmkvrhavindlplgrnademlrmvdallhfeehgevcpagwrkgdkgm
    kathqgvaeylkensikl
    

    Sequence, based on observed residues (ATOM records): (download)
    >1zofE (E:)
    mvvtklapdfkapavlgnnevdehfelsknlgkngvilffwpkdftfvcpteiiafdkrv
    kdfhekgfnvigvsidseqvhfawkntpvekggigqvsfpmvaditksisrdydvlfeea
    ialrgaflidknmkvrhavindlplgrnademlrmvdallhfeehgevcp
    

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >1zofF (F:)
    mvvtklapdfkapavlgnnevdehfelsknlgkngvilffwpkdftfvcpteiiafdkrv
    kdfhekgfnvigvsidseqvhfawkntpvekggigqvsfpmvaditksisrdydvlfeea
    ialrgaflidknmkvrhavindlplgrnademlrmvdallhfeehgevcpagwrkgdkgm
    kathqgvaeylkensikl
    

    Sequence, based on observed residues (ATOM records): (download)
    >1zofF (F:)
    mvvtklapdfkapavlgnnevdehfelsknlgkngvilffwpkdftfvcpteiiafdkrv
    kdfhekgfnvigvsidseqvhfawkntpvekggigqvsfpmvaditksisrdydvlfeea
    ialrgaflidknmkvrhavindlplgrnademlrmvdallhfeehgevcpagwrk
    

  • Chain 'G':
    Sequence, based on SEQRES records: (download)
    >1zofG (G:)
    mvvtklapdfkapavlgnnevdehfelsknlgkngvilffwpkdftfvcpteiiafdkrv
    kdfhekgfnvigvsidseqvhfawkntpvekggigqvsfpmvaditksisrdydvlfeea
    ialrgaflidknmkvrhavindlplgrnademlrmvdallhfeehgevcpagwrkgdkgm
    kathqgvaeylkensikl
    

    Sequence, based on observed residues (ATOM records): (download)
    >1zofG (G:)
    mvvtklapdfkapavlgnnevdehfelsknlgkngvilffwpkdftfvcpteiiafdkrv
    kdfhekgfnvigvsidseqvhfawkntpvekggigqvsfpmvaditksisrdydvlfeea
    ialrgaflidknmkvrhavindlplgrnademlrmvdallhfeehgevcp
    

  • Chain 'H':
    Sequence, based on SEQRES records: (download)
    >1zofH (H:)
    mvvtklapdfkapavlgnnevdehfelsknlgkngvilffwpkdftfvcpteiiafdkrv
    kdfhekgfnvigvsidseqvhfawkntpvekggigqvsfpmvaditksisrdydvlfeea
    ialrgaflidknmkvrhavindlplgrnademlrmvdallhfeehgevcpagwrkgdkgm
    kathqgvaeylkensikl
    

    Sequence, based on observed residues (ATOM records): (download)
    >1zofH (H:)
    mvvtklapdfkapavlgnnevdehfelsknlgkngvilffwpkdftfvcpteiiafdkrv
    kdfhekgfnvigvsidseqvhfawkntpvekggigqvsfpmvaditksisrdydvlfeea
    ialrgaflidknmkvrhavindlplgrnademlrmvdallhfeehgevcpagwrk
    

  • Chain 'I':
    Sequence, based on SEQRES records: (download)
    >1zofI (I:)
    mvvtklapdfkapavlgnnevdehfelsknlgkngvilffwpkdftfvcpteiiafdkrv
    kdfhekgfnvigvsidseqvhfawkntpvekggigqvsfpmvaditksisrdydvlfeea
    ialrgaflidknmkvrhavindlplgrnademlrmvdallhfeehgevcpagwrkgdkgm
    kathqgvaeylkensikl
    

    Sequence, based on observed residues (ATOM records): (download)
    >1zofI (I:)
    mvvtklapdfkapavlgnnevdehfelsknlgkngvilffwpkdftfvcpteiiafdkrv
    kdfhekgfnvigvsidseqvhfawkntpvekggigqvsfpmvaditksisrdydvlfeea
    ialrgaflidknmkvrhavindlplgrnademlrmvdallhfeehgevcp
    

  • Chain 'J':
    Sequence, based on SEQRES records: (download)
    >1zofJ (J:)
    mvvtklapdfkapavlgnnevdehfelsknlgkngvilffwpkdftfvcpteiiafdkrv
    kdfhekgfnvigvsidseqvhfawkntpvekggigqvsfpmvaditksisrdydvlfeea
    ialrgaflidknmkvrhavindlplgrnademlrmvdallhfeehgevcpagwrkgdkgm
    kathqgvaeylkensikl
    

    Sequence, based on observed residues (ATOM records): (download)
    >1zofJ (J:)
    mvvtklapdfkapavlgnnevdehfelsknlgkngvilffwpkdftfvcpteiiafdkrv
    kdfhekgfnvigvsidseqvhfawkntpvekggigqvsfpmvaditksisrdydvlfeea
    ialrgaflidknmkvrhavindlplgrnademlrmvdallhfeehgevcpagwrk