PDB entry 1zod

View 1zod on RCSB PDB site
Description: Crystal structure of dialkylglycine decarboxylase bound with cesium ion
Class: lyase
Keywords: decarboxylase, pyridoxal, cesium, LYASE
Deposited on 2005-05-12, released 2006-08-08
The last revision prior to the SCOPe 2.07 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: 0.2
AEROSPACI score: 0.5 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 2,2-Dialkylglycine decarboxylase
    Species: Burkholderia cepacia [TaxId:292]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P16932 (Start-432)
      • see remark 999 (14)
      • see remark 999 (80)
    Domains in SCOPe 2.07: d1zoda_
  • Heterogens: CS, NA, MES, PLP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1zodA (A:)
    mslnddatfwrnarhhlvryggtfepmiierakgsfvydadgraildftsgqmsavlghc
    hpeivsvigeyagkldhlfsemlsrpvvdlatrlanitppgldralllstgaesneaair
    maklvtgkyeivgfaqswhgmtgaaasatysagrkgvgpaavgsfaipapftyrprfern
    gaydylaeldyafdlidrqssgnlaafiaepilssggiielpdgymaalkrkceargmll
    ildeaqtgvgrtgtmfacqrdgvtpdiltlsktlgaglplaaivtsaaieerahelgylf
    ytthvsdplpaavglrvldvvqrdglvaranvmgdrlrrglldlmerfdcigdvrgrgll
    lgveivkdrrtkepadglgakitrecmnlglsmnivqlpgmggvfriappltvsedeidl
    glsllgqaieral
    

    Sequence, based on observed residues (ATOM records): (download)
    >1zodA (A:)
    lnddatfwrnarhhlvryggtfepmiierakgsfvydadgraildftsgqmsavlghchp
    eivsvigeyagkldhlfsemlsrpvvdlatrlanitppgldralllstgaesneaairma
    klvtgkyeivgfaqswhgmtgaaasatysagrkgvgpaavgsfaipapftyrprfernga
    ydylaeldyafdlidrqssgnlaafiaepilssggiielpdgymaalkrkceargmllil
    deaqtgvgrtgtmfacqrdgvtpdiltlsktlgaglplaaivtsaaieerahelgylfyt
    thvsdplpaavglrvldvvqrdglvaranvmgdrlrrglldlmerfdcigdvrgrglllg
    veivkdrrtkepadglgakitrecmnlglsmnivqlpgmggvfriappltvsedeidlgl
    sllgqaieral