PDB entry 1zmy

View 1zmy on RCSB PDB site
Description: cAbBCII-10 VHH framework with CDR loops of cAbLys3 grafted on it and in complex with hen egg white lysozyme
Class: immune system/hydrolase
Keywords: VHH; antibody; immune system; CDR grafting, IMMUNE SYSTEM/HYDROLASE COMPLEX
Deposited on 2005-05-11, released 2005-10-04
The last revision prior to the SCOPe 2.03 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-19.
Experiment type: XRAY
Resolution: 3 Å
R-factor: 0.206
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Antibody cabbcII-10:lys3
    Species: Camelus dromedarius [TaxId:9838]
    Database cross-references and differences (RAF-indexed):
    • PDB 1ZMY (0-End)
    Domains in SCOPe 2.03: d1zmya1
  • Chain 'L':
    Compound: Lysozyme C
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d1zmyl1
  • Chain 'M':
    Compound: Lysozyme C
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d1zmym1
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1zmyA (A:)
    qvqlvesgggsvqaggslrlsctasgytigpycmgwfrqapggereavaainmgggityy
    adsvkgrftisrdnakntvtlqmnslkpedtamyycaadstiyasyyecghglstggygy
    dswgqgtqvtvssrgrhhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >1zmyA (A:)
    qvqlvesgggsvqaggslrlsctasgytigpycmgwfrqapggereavaainmgggityy
    adsvkgrftisrdnakntvtlqmnslkpedtamyycaadstiyasyyecghglstggygy
    dswgqgtqvtvss
    

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1zmyL (L:)
    kvfgrcelaaamkrhgldnyrgyslgnwvcaakfesnfntqatnrntdgstdygilqins
    rwwcndgrtpgsrnlcnipcsallssditasvncakkivsdgngmnawvawrnrckgtdv
    qawirgcrl
    

  • Chain 'M':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1zmyM (M:)
    kvfgrcelaaamkrhgldnyrgyslgnwvcaakfesnfntqatnrntdgstdygilqins
    rwwcndgrtpgsrnlcnipcsallssditasvncakkivsdgngmnawvawrnrckgtdv
    qawirgcrl