PDB entry 1zku

View 1zku on RCSB PDB site
Description: Fitting of the gp9 structure in the EM density of bacteriophage T4 extended tail
Class: viral protein
Keywords: Structural protein, Viral protein
Deposited on 2005-05-04, released 2005-08-09
The last revision prior to the SCOPe 2.08 freeze date was dated 2018-07-18, with a file datestamp of 2018-07-13.
Experiment type: EM
Resolution: 15 Å
R-factor: N/A
AEROSPACI score: -0.13 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Baseplate structural protein Gp9
    Species: Enterobacteria phage T4 sensu lato [TaxId:10665]
    Gene: 9
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1zkua1
  • Chain 'B':
    Compound: Baseplate structural protein Gp9
    Species: Enterobacteria phage T4 sensu lato [TaxId:10665]
    Gene: 9
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1zkub1
  • Chain 'C':
    Compound: Baseplate structural protein Gp9
    Species: Enterobacteria phage T4 sensu lato [TaxId:10665]
    Gene: 9
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1zkuc1
  • Chain 'D':
    Compound: Baseplate structural protein Gp9
    Species: Enterobacteria phage T4 sensu lato [TaxId:10665]
    Gene: 9
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1zkud1
  • Chain 'E':
    Compound: Baseplate structural protein Gp9
    Species: Enterobacteria phage T4 sensu lato [TaxId:10665]
    Gene: 9
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1zkue1
  • Chain 'F':
    Compound: Baseplate structural protein Gp9
    Species: Enterobacteria phage T4 sensu lato [TaxId:10665]
    Gene: 9
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1zkuf1
  • Chain 'G':
    Compound: Baseplate structural protein Gp9
    Species: Enterobacteria phage T4 sensu lato [TaxId:10665]
    Gene: 9
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1zkug1
  • Chain 'H':
    Compound: Baseplate structural protein Gp9
    Species: Enterobacteria phage T4 sensu lato [TaxId:10665]
    Gene: 9
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1zkuh1
  • Chain 'I':
    Compound: Baseplate structural protein Gp9
    Species: Enterobacteria phage T4 sensu lato [TaxId:10665]
    Gene: 9
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1zkui1
  • Chain 'J':
    Compound: Baseplate structural protein Gp9
    Species: Enterobacteria phage T4 sensu lato [TaxId:10665]
    Gene: 9
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1zkuj1
  • Chain 'K':
    Compound: Baseplate structural protein Gp9
    Species: Enterobacteria phage T4 sensu lato [TaxId:10665]
    Gene: 9
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1zkuk1
  • Chain 'L':
    Compound: Baseplate structural protein Gp9
    Species: Enterobacteria phage T4 sensu lato [TaxId:10665]
    Gene: 9
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1zkul1
  • Chain 'M':
    Compound: Baseplate structural protein Gp9
    Species: Enterobacteria phage T4 sensu lato [TaxId:10665]
    Gene: 9
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1zkum1
  • Chain 'N':
    Compound: Baseplate structural protein Gp9
    Species: Enterobacteria phage T4 sensu lato [TaxId:10665]
    Gene: 9
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1zkun1
  • Chain 'O':
    Compound: Baseplate structural protein Gp9
    Species: Enterobacteria phage T4 sensu lato [TaxId:10665]
    Gene: 9
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1zkuo1
  • Chain 'P':
    Compound: Baseplate structural protein Gp9
    Species: Enterobacteria phage T4 sensu lato [TaxId:10665]
    Gene: 9
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1zkup1
  • Chain 'Q':
    Compound: Baseplate structural protein Gp9
    Species: Enterobacteria phage T4 sensu lato [TaxId:10665]
    Gene: 9
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1zkuq1
  • Chain 'R':
    Compound: Baseplate structural protein Gp9
    Species: Enterobacteria phage T4 sensu lato [TaxId:10665]
    Gene: 9
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1zkur1
  • Heterogens: EPE

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1zkuA (A:)
mfiqepkklidtgeignastgdilfdggnkinsdfnaiynafgdqrkmavangtgadgqi
ihatgyyqkhsiteyatpvkvgtrhdidtstvgvkviiergelgdcvefinsngsisvtn
pltiqaidsikgvsgnlvvtspyskvtlrcissdnstsvwnysiesmfgqkespaegtwn
istsgsvdiplfhrteynmakllvtcqsvdgrkiktaeinilvdtvnsevisseyavmrv
gneteedeianiafsikenyvtatissstvgmraavkviatqkigvaq

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1zkuB (B:)
mfiqepkklidtgeignastgdilfdggnkinsdfnaiynafgdqrkmavangtgadgqi
ihatgyyqkhsiteyatpvkvgtrhdidtstvgvkviiergelgdcvefinsngsisvtn
pltiqaidsikgvsgnlvvtspyskvtlrcissdnstsvwnysiesmfgqkespaegtwn
istsgsvdiplfhrteynmakllvtcqsvdgrkiktaeinilvdtvnsevisseyavmrv
gneteedeianiafsikenyvtatissstvgmraavkviatqkigvaq

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1zkuC (C:)
mfiqepkklidtgeignastgdilfdggnkinsdfnaiynafgdqrkmavangtgadgqi
ihatgyyqkhsiteyatpvkvgtrhdidtstvgvkviiergelgdcvefinsngsisvtn
pltiqaidsikgvsgnlvvtspyskvtlrcissdnstsvwnysiesmfgqkespaegtwn
istsgsvdiplfhrteynmakllvtcqsvdgrkiktaeinilvdtvnsevisseyavmrv
gneteedeianiafsikenyvtatissstvgmraavkviatqkigvaq

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1zkuD (D:)
mfiqepkklidtgeignastgdilfdggnkinsdfnaiynafgdqrkmavangtgadgqi
ihatgyyqkhsiteyatpvkvgtrhdidtstvgvkviiergelgdcvefinsngsisvtn
pltiqaidsikgvsgnlvvtspyskvtlrcissdnstsvwnysiesmfgqkespaegtwn
istsgsvdiplfhrteynmakllvtcqsvdgrkiktaeinilvdtvnsevisseyavmrv
gneteedeianiafsikenyvtatissstvgmraavkviatqkigvaq

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1zkuE (E:)
mfiqepkklidtgeignastgdilfdggnkinsdfnaiynafgdqrkmavangtgadgqi
ihatgyyqkhsiteyatpvkvgtrhdidtstvgvkviiergelgdcvefinsngsisvtn
pltiqaidsikgvsgnlvvtspyskvtlrcissdnstsvwnysiesmfgqkespaegtwn
istsgsvdiplfhrteynmakllvtcqsvdgrkiktaeinilvdtvnsevisseyavmrv
gneteedeianiafsikenyvtatissstvgmraavkviatqkigvaq

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1zkuF (F:)
mfiqepkklidtgeignastgdilfdggnkinsdfnaiynafgdqrkmavangtgadgqi
ihatgyyqkhsiteyatpvkvgtrhdidtstvgvkviiergelgdcvefinsngsisvtn
pltiqaidsikgvsgnlvvtspyskvtlrcissdnstsvwnysiesmfgqkespaegtwn
istsgsvdiplfhrteynmakllvtcqsvdgrkiktaeinilvdtvnsevisseyavmrv
gneteedeianiafsikenyvtatissstvgmraavkviatqkigvaq

  • Chain 'G':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1zkuG (G:)
mfiqepkklidtgeignastgdilfdggnkinsdfnaiynafgdqrkmavangtgadgqi
ihatgyyqkhsiteyatpvkvgtrhdidtstvgvkviiergelgdcvefinsngsisvtn
pltiqaidsikgvsgnlvvtspyskvtlrcissdnstsvwnysiesmfgqkespaegtwn
istsgsvdiplfhrteynmakllvtcqsvdgrkiktaeinilvdtvnsevisseyavmrv
gneteedeianiafsikenyvtatissstvgmraavkviatqkigvaq

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1zkuH (H:)
mfiqepkklidtgeignastgdilfdggnkinsdfnaiynafgdqrkmavangtgadgqi
ihatgyyqkhsiteyatpvkvgtrhdidtstvgvkviiergelgdcvefinsngsisvtn
pltiqaidsikgvsgnlvvtspyskvtlrcissdnstsvwnysiesmfgqkespaegtwn
istsgsvdiplfhrteynmakllvtcqsvdgrkiktaeinilvdtvnsevisseyavmrv
gneteedeianiafsikenyvtatissstvgmraavkviatqkigvaq

  • Chain 'I':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1zkuI (I:)
mfiqepkklidtgeignastgdilfdggnkinsdfnaiynafgdqrkmavangtgadgqi
ihatgyyqkhsiteyatpvkvgtrhdidtstvgvkviiergelgdcvefinsngsisvtn
pltiqaidsikgvsgnlvvtspyskvtlrcissdnstsvwnysiesmfgqkespaegtwn
istsgsvdiplfhrteynmakllvtcqsvdgrkiktaeinilvdtvnsevisseyavmrv
gneteedeianiafsikenyvtatissstvgmraavkviatqkigvaq

  • Chain 'J':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1zkuJ (J:)
mfiqepkklidtgeignastgdilfdggnkinsdfnaiynafgdqrkmavangtgadgqi
ihatgyyqkhsiteyatpvkvgtrhdidtstvgvkviiergelgdcvefinsngsisvtn
pltiqaidsikgvsgnlvvtspyskvtlrcissdnstsvwnysiesmfgqkespaegtwn
istsgsvdiplfhrteynmakllvtcqsvdgrkiktaeinilvdtvnsevisseyavmrv
gneteedeianiafsikenyvtatissstvgmraavkviatqkigvaq

  • Chain 'K':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1zkuK (K:)
mfiqepkklidtgeignastgdilfdggnkinsdfnaiynafgdqrkmavangtgadgqi
ihatgyyqkhsiteyatpvkvgtrhdidtstvgvkviiergelgdcvefinsngsisvtn
pltiqaidsikgvsgnlvvtspyskvtlrcissdnstsvwnysiesmfgqkespaegtwn
istsgsvdiplfhrteynmakllvtcqsvdgrkiktaeinilvdtvnsevisseyavmrv
gneteedeianiafsikenyvtatissstvgmraavkviatqkigvaq

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1zkuL (L:)
mfiqepkklidtgeignastgdilfdggnkinsdfnaiynafgdqrkmavangtgadgqi
ihatgyyqkhsiteyatpvkvgtrhdidtstvgvkviiergelgdcvefinsngsisvtn
pltiqaidsikgvsgnlvvtspyskvtlrcissdnstsvwnysiesmfgqkespaegtwn
istsgsvdiplfhrteynmakllvtcqsvdgrkiktaeinilvdtvnsevisseyavmrv
gneteedeianiafsikenyvtatissstvgmraavkviatqkigvaq

  • Chain 'M':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1zkuM (M:)
mfiqepkklidtgeignastgdilfdggnkinsdfnaiynafgdqrkmavangtgadgqi
ihatgyyqkhsiteyatpvkvgtrhdidtstvgvkviiergelgdcvefinsngsisvtn
pltiqaidsikgvsgnlvvtspyskvtlrcissdnstsvwnysiesmfgqkespaegtwn
istsgsvdiplfhrteynmakllvtcqsvdgrkiktaeinilvdtvnsevisseyavmrv
gneteedeianiafsikenyvtatissstvgmraavkviatqkigvaq

  • Chain 'N':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1zkuN (N:)
mfiqepkklidtgeignastgdilfdggnkinsdfnaiynafgdqrkmavangtgadgqi
ihatgyyqkhsiteyatpvkvgtrhdidtstvgvkviiergelgdcvefinsngsisvtn
pltiqaidsikgvsgnlvvtspyskvtlrcissdnstsvwnysiesmfgqkespaegtwn
istsgsvdiplfhrteynmakllvtcqsvdgrkiktaeinilvdtvnsevisseyavmrv
gneteedeianiafsikenyvtatissstvgmraavkviatqkigvaq

  • Chain 'O':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1zkuO (O:)
mfiqepkklidtgeignastgdilfdggnkinsdfnaiynafgdqrkmavangtgadgqi
ihatgyyqkhsiteyatpvkvgtrhdidtstvgvkviiergelgdcvefinsngsisvtn
pltiqaidsikgvsgnlvvtspyskvtlrcissdnstsvwnysiesmfgqkespaegtwn
istsgsvdiplfhrteynmakllvtcqsvdgrkiktaeinilvdtvnsevisseyavmrv
gneteedeianiafsikenyvtatissstvgmraavkviatqkigvaq

  • Chain 'P':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1zkuP (P:)
mfiqepkklidtgeignastgdilfdggnkinsdfnaiynafgdqrkmavangtgadgqi
ihatgyyqkhsiteyatpvkvgtrhdidtstvgvkviiergelgdcvefinsngsisvtn
pltiqaidsikgvsgnlvvtspyskvtlrcissdnstsvwnysiesmfgqkespaegtwn
istsgsvdiplfhrteynmakllvtcqsvdgrkiktaeinilvdtvnsevisseyavmrv
gneteedeianiafsikenyvtatissstvgmraavkviatqkigvaq

  • Chain 'Q':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1zkuQ (Q:)
mfiqepkklidtgeignastgdilfdggnkinsdfnaiynafgdqrkmavangtgadgqi
ihatgyyqkhsiteyatpvkvgtrhdidtstvgvkviiergelgdcvefinsngsisvtn
pltiqaidsikgvsgnlvvtspyskvtlrcissdnstsvwnysiesmfgqkespaegtwn
istsgsvdiplfhrteynmakllvtcqsvdgrkiktaeinilvdtvnsevisseyavmrv
gneteedeianiafsikenyvtatissstvgmraavkviatqkigvaq

  • Chain 'R':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1zkuR (R:)
mfiqepkklidtgeignastgdilfdggnkinsdfnaiynafgdqrkmavangtgadgqi
ihatgyyqkhsiteyatpvkvgtrhdidtstvgvkviiergelgdcvefinsngsisvtn
pltiqaidsikgvsgnlvvtspyskvtlrcissdnstsvwnysiesmfgqkespaegtwn
istsgsvdiplfhrteynmakllvtcqsvdgrkiktaeinilvdtvnsevisseyavmrv
gneteedeianiafsikenyvtatissstvgmraavkviatqkigvaq