PDB entry 1zkd
View 1zkd on RCSB PDB site
Description: X-Ray structure of the putative protein Q6N1P6 from Rhodopseudomonas palustris at the resolution 2.1 A , Northeast Structural Genomics Consortium target RpR58
Class: structural genomics, unknown function
Keywords: NESG, RpR58, Structural Genomics, PSI, Protein Structure Initiative, Northeast Structural Genomics Consortium, UNKNOWN FUNCTION
Deposited on
2005-05-02, released
2005-05-10
The last revision prior to the SCOPe 2.08 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-08.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.223
AEROSPACI score: 0.39
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: duf185
Species: Rhodopseudomonas palustris [TaxId:258594]
Gene: RPA4359
Database cross-references and differences (RAF-indexed):
- Uniprot Q6N1P6
- modified residue (20)
- modified residue (26)
- modified residue (59)
- modified residue (93-94)
- modified residue (316)
- modified residue (342)
- modified residue (345)
Domains in SCOPe 2.08: d1zkda1 - Chain 'B':
Compound: duf185
Species: Rhodopseudomonas palustris [TaxId:258594]
Gene: RPA4359
Database cross-references and differences (RAF-indexed):
- Uniprot Q6N1P6
- modified residue (20)
- modified residue (26)
- modified residue (59)
- modified residue (93-94)
- modified residue (316)
- modified residue (342)
- modified residue (345)
Domains in SCOPe 2.08: d1zkdb_ - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1zkdA (A:)
midqtalateikrlikaagpmpvwrymelclghpehgyyvtrdplgregdfttspeisqm
fgellglwsasvwkaadepqtlrlieigpgrgtmmadalralrvlpilyqslsvhlvein
pvlrqkqqtllagirnihwhdsfedvpegpavilaneyfdvlpihqaikretgwhervie
igasgelvfgvaadpipgfeallpplarlsppgavfewrpdteilkiasrvrdqggaali
idyghlrsdvgdtfqaiashsyadplqhpgradltahvdfdalgraaesigarahgpvtq
gaflkrlgietralslmakatpqvsediagalqrltgegrgamgsmfkvigvsdpkietl
valsddtdreaerrqgthglehhhhhh
Sequence, based on observed residues (ATOM records): (download)
>1zkdA (A:)
idqtalateikrlikaagpmpvwrymelclghpehgyyvtrfttspeisqmfgellglws
asvwkaadepqtlrlieigpgrgtmmadalralrvlpilyqslsvhlveinpvlrqkqqt
llagirnihwhdsfedvpegpavilaneyfdvlpihqaikretgwhervieigasgelvf
gvaadpipgfeallpplarlsppgavfewrpdteilkiasrvrdqggaaliidyghlrsd
vgdtfqaiashsyadplqhpgradltahvdfdalgraaesigarahgpvtqgaflkrlgi
etralslmakatpqvsediagalqrltgegrgamgsmfkvigvsdpkietlvalsdd
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1zkdB (B:)
midqtalateikrlikaagpmpvwrymelclghpehgyyvtrdplgregdfttspeisqm
fgellglwsasvwkaadepqtlrlieigpgrgtmmadalralrvlpilyqslsvhlvein
pvlrqkqqtllagirnihwhdsfedvpegpavilaneyfdvlpihqaikretgwhervie
igasgelvfgvaadpipgfeallpplarlsppgavfewrpdteilkiasrvrdqggaali
idyghlrsdvgdtfqaiashsyadplqhpgradltahvdfdalgraaesigarahgpvtq
gaflkrlgietralslmakatpqvsediagalqrltgegrgamgsmfkvigvsdpkietl
valsddtdreaerrqgthglehhhhhh
Sequence, based on observed residues (ATOM records): (download)
>1zkdB (B:)
idqtalateikrlikaagpmpvwrymelclghpehgyyvtfttspeisqmfgellglwsa
svwkaadepqtlrlieigpgrgtmmadalralrvlpilyqslsvhlveinpvlrqkqqtl
lagirnihwhdsfedvpegpavilaneyfdvlpihqaikretgwhervieigasgelvfg
vaadpipgfeallpplarlsppgavfewrpdteilkiasrvrdqggaaliidyghlrsdv
gdtfqaiashsyadplqhpgradltahvdfdalgraaesigarahgpvtqgaflkrlgie
tralslmakatpqvsediagalqrltgegrgamgsmfkvigvsdpkietlvalsdd