PDB entry 1zho
View 1zho on RCSB PDB site
Description: The structure of a ribosomal protein L1 in complex with mRNA
Class: structural protein/RNA
Keywords: ribosome, ribosomal protein, mRNA-protein complex, l1, regulation of gene expression, RNA-protein interaction, structural protein/RNA complex
Deposited on
2005-04-26, released
2006-05-09
The last revision prior to the SCOPe 2.02 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: 0.218
AEROSPACI score: 0.27
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: 50s ribosomal protein l1
Species: Thermus thermophilus [TaxId:274]
Gene: rplA, rpl1
Database cross-references and differences (RAF-indexed):
- Uniprot P27150 (0-227)
- modified residue (107)
- modified residue (119)
- modified residue (217)
Domains in SCOPe 2.02: d1zhoa1 - Chain 'B':
Compound: mRNA
Species: synthetic, synthetic
- Chain 'C':
Compound: 50s ribosomal protein l1
Species: Thermus thermophilus [TaxId:274]
Gene: rplA, rpl1
Database cross-references and differences (RAF-indexed):
- Uniprot P27150 (0-227)
- modified residue (107)
- modified residue (119)
- modified residue (217)
Domains in SCOPe 2.02: d1zhoc1 - Chain 'D':
Compound: mRNA
Species: synthetic, synthetic
- Chain 'E':
Compound: 50s ribosomal protein l1
Species: Thermus thermophilus [TaxId:274]
Gene: rplA, rpl1
Database cross-references and differences (RAF-indexed):
- Uniprot P27150 (0-227)
- modified residue (107)
- modified residue (119)
- modified residue (217)
Domains in SCOPe 2.02: d1zhoe1 - Chain 'F':
Compound: mRNA
Species: synthetic, synthetic
- Chain 'G':
Compound: 50s ribosomal protein l1
Species: Thermus thermophilus [TaxId:274]
Gene: rplA, rpl1
Database cross-references and differences (RAF-indexed):
- Uniprot P27150 (0-227)
- modified residue (107)
- modified residue (119)
- modified residue (217)
Domains in SCOPe 2.02: d1zhog1 - Chain 'H':
Compound: mRNA
Species: synthetic, synthetic
- Heterogens: K, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>1zhoA (A:)
pkhgkryrallekvdpnkiytideaahlvkelatakfdetvevhaklgidprrsdqnvrg
tvslphglgkqvrvlaiakgekikeaeeagadyvggeeiiqkildgwmdfdavvatpdvm
gavgsklgrilgprgllpnpkagtvgfnigeiireikagriefrndktgaihapvgkasf
ppekladnirafiraleahkpegakgtflrsvyvtttmgpsvrinphs
- Chain 'B':
No sequence available.
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>1zhoC (C:)
pkhgkryrallekvdpnkiytideaahlvkelatakfdetvevhaklgidprrsdqnvrg
tvslphglgkqvrvlaiakgekikeaeeagadyvggeeiiqkildgwmdfdavvatpdvm
gavgsklgrilgprgllpnpkagtvgfnigeiireikagriefrndktgaihapvgkasf
ppekladnirafiraleahkpegakgtflrsvyvtttmgpsvrinphs
- Chain 'D':
No sequence available.
- Chain 'E':
Sequence; same for both SEQRES and ATOM records: (download)
>1zhoE (E:)
pkhgkryrallekvdpnkiytideaahlvkelatakfdetvevhaklgidprrsdqnvrg
tvslphglgkqvrvlaiakgekikeaeeagadyvggeeiiqkildgwmdfdavvatpdvm
gavgsklgrilgprgllpnpkagtvgfnigeiireikagriefrndktgaihapvgkasf
ppekladnirafiraleahkpegakgtflrsvyvtttmgpsvrinphs
- Chain 'F':
No sequence available.
- Chain 'G':
Sequence; same for both SEQRES and ATOM records: (download)
>1zhoG (G:)
pkhgkryrallekvdpnkiytideaahlvkelatakfdetvevhaklgidprrsdqnvrg
tvslphglgkqvrvlaiakgekikeaeeagadyvggeeiiqkildgwmdfdavvatpdvm
gavgsklgrilgprgllpnpkagtvgfnigeiireikagriefrndktgaihapvgkasf
ppekladnirafiraleahkpegakgtflrsvyvtttmgpsvrinphs
- Chain 'H':
No sequence available.