PDB entry 1zgq

View 1zgq on RCSB PDB site
Description: Crystal Structure of the Discosoma Red Fluorescent Protein (DsRed) Variant Q66M
Class: luminescent protein
Keywords: RFP, red, fluorescent protein, DsRed, drFP583, chromophore, GFP, coral, beta barrel, beta can, LUMINESCENT PROTEIN
Deposited on 2005-04-21, released 2005-08-02
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-06-30, with a file datestamp of 2009-06-26.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.194
AEROSPACI score: 0.48 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: red fluorescent protein drfp583
    Species: Discosoma sp. [TaxId:86600]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9U6Y8 (Start-224)
      • chromophore (65)
    Domains in SCOPe 2.08: d1zgqa_
  • Chain 'B':
    Compound: red fluorescent protein drfp583
    Species: Discosoma sp. [TaxId:86600]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9U6Y8 (Start-224)
      • chromophore (65)
    Domains in SCOPe 2.08: d1zgqb_
  • Chain 'C':
    Compound: red fluorescent protein drfp583
    Species: Discosoma sp. [TaxId:86600]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9U6Y8 (Start-224)
      • chromophore (65)
    Domains in SCOPe 2.08: d1zgqc_
  • Chain 'D':
    Compound: red fluorescent protein drfp583
    Species: Discosoma sp. [TaxId:86600]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9U6Y8 (Start-224)
      • chromophore (65)
    Domains in SCOPe 2.08: d1zgqd_
  • Chain 'E':
    Compound: red fluorescent protein drfp583
    Species: Discosoma sp. [TaxId:86600]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9U6Y8 (Start-224)
      • chromophore (65)
    Domains in SCOPe 2.08: d1zgqe_
  • Chain 'F':
    Compound: red fluorescent protein drfp583
    Species: Discosoma sp. [TaxId:86600]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9U6Y8 (Start-224)
      • chromophore (65)
    Domains in SCOPe 2.08: d1zgqf_
  • Chain 'G':
    Compound: red fluorescent protein drfp583
    Species: Discosoma sp. [TaxId:86600]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9U6Y8 (Start-224)
      • chromophore (65)
    Domains in SCOPe 2.08: d1zgqg_
  • Chain 'H':
    Compound: red fluorescent protein drfp583
    Species: Discosoma sp. [TaxId:86600]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9U6Y8 (Start-224)
      • chromophore (65)
    Domains in SCOPe 2.08: d1zgqh_
  • Heterogens: PEG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1zgqA (A:)
mrssknvikefmrfkvrmegtvnghefeiegegegrpyeghntvklkvtkggplpfawdi
lspqfmygskvyvkhpadipdykklsfpegfkwervmnfedggvvtvtqdsslqdgcfiy
kvkfigvnfpsdgpvmqkktmgweasterlyprdgvlkgeihkalklkdgghylvefksi
ymakkpvqlpgyyyvdsklditshnedytiveqyertegrhhlfl

    Sequence, based on observed residues (ATOM records): (download) 
    >1zgqA (A:)
nvikefmrfkvrmegtvnghefeiegegegrpyeghntvklkvtkggplpfawdilspqf
mygskvyvkhpadipdykklsfpegfkwervmnfedggvvtvtqdsslqdgcfiykvkfi
gvnfpsdgpvmqkktmgweasterlyprdgvlkgeihkalklkdgghylvefksiymakk
pvqlpgyyyvdsklditshnedytiveqyertegrhhlfl

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1zgqB (B:)
mrssknvikefmrfkvrmegtvnghefeiegegegrpyeghntvklkvtkggplpfawdi
lspqfmygskvyvkhpadipdykklsfpegfkwervmnfedggvvtvtqdsslqdgcfiy
kvkfigvnfpsdgpvmqkktmgweasterlyprdgvlkgeihkalklkdgghylvefksi
ymakkpvqlpgyyyvdsklditshnedytiveqyertegrhhlfl

    Sequence, based on observed residues (ATOM records): (download) 
    >1zgqB (B:)
nvikefmrfkvrmegtvnghefeiegegegrpyeghntvklkvtkggplpfawdilspqf
mygskvyvkhpadipdykklsfpegfkwervmnfedggvvtvtqdsslqdgcfiykvkfi
gvnfpsdgpvmqkktmgweasterlyprdgvlkgeihkalklkdgghylvefksiymakk
pvqlpgyyyvdsklditshnedytiveqyertegrhhlfl

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1zgqC (C:)
mrssknvikefmrfkvrmegtvnghefeiegegegrpyeghntvklkvtkggplpfawdi
lspqfmygskvyvkhpadipdykklsfpegfkwervmnfedggvvtvtqdsslqdgcfiy
kvkfigvnfpsdgpvmqkktmgweasterlyprdgvlkgeihkalklkdgghylvefksi
ymakkpvqlpgyyyvdsklditshnedytiveqyertegrhhlfl

    Sequence, based on observed residues (ATOM records): (download) 
    >1zgqC (C:)
nvikefmrfkvrmegtvnghefeiegegegrpyeghntvklkvtkggplpfawdilspqf
mygskvyvkhpadipdykklsfpegfkwervmnfedggvvtvtqdsslqdgcfiykvkfi
gvnfpsdgpvmqkktmgweasterlyprdgvlkgeihkalklkdgghylvefksiymakk
pvqlpgyyyvdsklditshnedytiveqyertegrhhlfl

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1zgqD (D:)
mrssknvikefmrfkvrmegtvnghefeiegegegrpyeghntvklkvtkggplpfawdi
lspqfmygskvyvkhpadipdykklsfpegfkwervmnfedggvvtvtqdsslqdgcfiy
kvkfigvnfpsdgpvmqkktmgweasterlyprdgvlkgeihkalklkdgghylvefksi
ymakkpvqlpgyyyvdsklditshnedytiveqyertegrhhlfl

    Sequence, based on observed residues (ATOM records): (download) 
    >1zgqD (D:)
nvikefmrfkvrmegtvnghefeiegegegrpyeghntvklkvtkggplpfawdilspqf
mygskvyvkhpadipdykklsfpegfkwervmnfedggvvtvtqdsslqdgcfiykvkfi
gvnfpsdgpvmqkktmgweasterlyprdgvlkgeihkalklkdgghylvefksiymakk
pvqlpgyyyvdsklditshnedytiveqyertegrhhlfl

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >1zgqE (E:)
mrssknvikefmrfkvrmegtvnghefeiegegegrpyeghntvklkvtkggplpfawdi
lspqfmygskvyvkhpadipdykklsfpegfkwervmnfedggvvtvtqdsslqdgcfiy
kvkfigvnfpsdgpvmqkktmgweasterlyprdgvlkgeihkalklkdgghylvefksi
ymakkpvqlpgyyyvdsklditshnedytiveqyertegrhhlfl

    Sequence, based on observed residues (ATOM records): (download) 
    >1zgqE (E:)
nvikefmrfkvrmegtvnghefeiegegegrpyeghntvklkvtkggplpfawdilspqf
mygskvyvkhpadipdykklsfpegfkwervmnfedggvvtvtqdsslqdgcfiykvkfi
gvnfpsdgpvmqkktmgweasterlyprdgvlkgeihkalklkdgghylvefksiymakk
pvqlpgyyyvdsklditshnedytiveqyertegrhhlfl

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >1zgqF (F:)
mrssknvikefmrfkvrmegtvnghefeiegegegrpyeghntvklkvtkggplpfawdi
lspqfmygskvyvkhpadipdykklsfpegfkwervmnfedggvvtvtqdsslqdgcfiy
kvkfigvnfpsdgpvmqkktmgweasterlyprdgvlkgeihkalklkdgghylvefksi
ymakkpvqlpgyyyvdsklditshnedytiveqyertegrhhlfl

    Sequence, based on observed residues (ATOM records): (download) 
    >1zgqF (F:)
nvikefmrfkvrmegtvnghefeiegegegrpyeghntvklkvtkggplpfawdilspqf
mygskvyvkhpadipdykklsfpegfkwervmnfedggvvtvtqdsslqdgcfiykvkfi
gvnfpsdgpvmqkktmgweasterlyprdgvlkgeihkalklkdgghylvefksiymakk
pvqlpgyyyvdsklditshnedytiveqyertegrhhlfl

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >1zgqG (G:)
mrssknvikefmrfkvrmegtvnghefeiegegegrpyeghntvklkvtkggplpfawdi
lspqfmygskvyvkhpadipdykklsfpegfkwervmnfedggvvtvtqdsslqdgcfiy
kvkfigvnfpsdgpvmqkktmgweasterlyprdgvlkgeihkalklkdgghylvefksi
ymakkpvqlpgyyyvdsklditshnedytiveqyertegrhhlfl

    Sequence, based on observed residues (ATOM records): (download) 
    >1zgqG (G:)
nvikefmrfkvrmegtvnghefeiegegegrpyeghntvklkvtkggplpfawdilspqf
mygskvyvkhpadipdykklsfpegfkwervmnfedggvvtvtqdsslqdgcfiykvkfi
gvnfpsdgpvmqkktmgweasterlyprdgvlkgeihkalklkdgghylvefksiymakk
pvqlpgyyyvdsklditshnedytiveqyertegrhhlfl

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >1zgqH (H:)
mrssknvikefmrfkvrmegtvnghefeiegegegrpyeghntvklkvtkggplpfawdi
lspqfmygskvyvkhpadipdykklsfpegfkwervmnfedggvvtvtqdsslqdgcfiy
kvkfigvnfpsdgpvmqkktmgweasterlyprdgvlkgeihkalklkdgghylvefksi
ymakkpvqlpgyyyvdsklditshnedytiveqyertegrhhlfl

    Sequence, based on observed residues (ATOM records): (download) 
    >1zgqH (H:)
nvikefmrfkvrmegtvnghefeiegegegrpyeghntvklkvtkggplpfawdilspqf
mygskvyvkhpadipdykklsfpegfkwervmnfedggvvtvtqdsslqdgcfiykvkfi
gvnfpsdgpvmqkktmgweasterlyprdgvlkgeihkalklkdgghylvefksiymakk
pvqlpgyyyvdsklditshnedytiveqyertegrhhlfl