PDB entry 1zdj
View 1zdj on RCSB PDB site
Description: structure of bacteriophage coat protein-loop RNA complex
Class: Virus/RNA
Keywords: COAT PROTEIN/RNA COMPLEX, COAT PROTEIN, RNA-BINDING, VIRAL PROTEIN CAPSID, RNA FRAGMENT, Icosahedral virus, Virus/RNA COMPLEX
Deposited on
1997-12-18, released
1998-07-01
The last revision prior to the SCOPe 2.05 freeze date was dated
2009-02-24, with a file datestamp of
2009-02-19.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: 0.182
AEROSPACI score: 0.28
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: protein (ms2 protein capsid)
Species: Enterobacteria phage MS2 [TaxId:12022]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d1zdja_ - Chain 'B':
Compound: protein (ms2 protein capsid)
Species: Enterobacteria phage MS2 [TaxId:12022]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d1zdjb_ - Chain 'C':
Compound: protein (ms2 protein capsid)
Species: Enterobacteria phage MS2 [TaxId:12022]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d1zdjc_ - Chain 'R':
Compound: RNA (5'-r(*gp*gp*ap*up*cp*ap*cp*c)-3')
- Chain 'S':
Compound: RNA (5'-r(*gp*gp*ap*up*cp*ap*cp*c)-3')
- Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>1zdjA (A:)
asnftqfvlvdnggtgdvtvapsnfangvaewissnsrsqaykvtcsvrqssaqnrkyti
kvevpkvatqtvggvelpvaawrsylnmeltipifatnsdcelivkamqgllkdgnpips
aiaansgiy
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>1zdjB (B:)
asnftqfvlvdnggtgdvtvapsnfangvaewissnsrsqaykvtcsvrqssaqnrkyti
kvevpkvatqtvggvelpvaawrsylnmeltipifatnsdcelivkamqgllkdgnpips
aiaansgiy
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>1zdjC (C:)
asnftqfvlvdnggtgdvtvapsnfangvaewissnsrsqaykvtcsvrqssaqnrkyti
kvevpkvatqtvggvelpvaawrsylnmeltipifatnsdcelivkamqgllkdgnpips
aiaansgiy
- Chain 'R':
No sequence available.
- Chain 'S':
No sequence available.