PDB entry 1zdf

View 1zdf on RCSB PDB site
Description: Ser162 mutant of glycogenin complexed with UDP-glucose and manganese
Class: transferase
Keywords: glycosyltransferase
Deposited on 2005-04-14, released 2005-04-26
The last revision prior to the SCOP 1.73 freeze date was dated 2005-07-05, with a file datestamp of 2007-06-28.
Experiment type: XRAY
Resolution: 2.45 Å
R-factor: 0.199
AEROSPACI score: 0.35 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: glycogenin-1
    Species: Oryctolagus cuniculus
    Gene: GYG, GYG1
    Database cross-references and differences (RAF-indexed):
    • Uniprot P13280 (20-End)
      • engineered (182)
    Domains in SCOP 1.73: d1zdfa1
  • Heterogens: MN, SO4, UPG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1zdfA (A:)
mgsshhhhhhssglvprgshmtdqafvtlttndayakgalvlgsslkqhrtsrrlavltt
pqvsdtmrkaleivfdevitvdildsgdsahltlmkrpelgvtltklhcwsltqyskcvf
mdadtlvlaniddlfereelsaapdpgwpdcfnsgvfvyqpsvetynqllhvaseqgsfd
ggsqgllntffnswattdirkhlpfiynlssisiysylpafkafganakvvhflgqtkpw
nytydtktksvrseghdptmthpqflnvwwdifttsvvpllqqfglvqdtcsyqhvedvs
gavshlslgetpattqpfvsseerkerweqgqadymgadsfdnikkkldtylq

    Sequence, based on observed residues (ATOM records): (download) 
    >1zdfA (A:)
mtdqafvtlttndayakgalvlgsslkqhrtsrrlavlttpqvsdtmrkaleivfdevit
vdildsgdsahltlmkrpelgvtltklhcwsltqyskcvfmdadtlvlaniddlfereel
saapdpgwpdcfnsgvfvyqpsvetynqllhvaseqgsfdggsqgllntffnswattdir
khlpfiynlssisiysylpafkafganakvvhflgqtkpwnytydtktksvrsmthpqfl
nvwwdifttsvvpllqqf