PDB entry 1zbb
View 1zbb on RCSB PDB site
Description: Structure of the 4_601_167 Tetranucleosome
Class: structural protein/DNA
Keywords: tetranucleosome, nucleosome, chromatin, chromatin fiber, histone, protein-DNA interaction, nucleoprotein, supercoiled DNA, nucleosome core, protein-DNA complex, structural protein/DNA complex
Deposited on
2005-04-08, released
2005-07-12
The last revision prior to the SCOPe 2.03 freeze date was dated
2009-02-24, with a file datestamp of
2009-02-03.
Experiment type: XRAY
Resolution: 9 Å
R-factor: 0.386
AEROSPACI score: -0.16
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: histone h3
Species: Xenopus laevis [TaxId:8355]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d1zbba1 - Chain 'B':
Compound: histone h4
Species: Xenopus laevis [TaxId:8355]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d1zbbb1 - Chain 'C':
Compound: histone h2a.1
Species: Xenopus laevis [TaxId:8355]
Database cross-references and differences (RAF-indexed):
- Chain 'D':
Compound: Histone H2B.1
Species: Xenopus laevis [TaxId:8355]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d1zbbd1 - Chain 'E':
Compound: histone h3
Species: Xenopus laevis [TaxId:8355]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d1zbbe1 - Chain 'F':
Compound: histone h4
Species: Xenopus laevis [TaxId:8355]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d1zbbf1 - Chain 'G':
Compound: histone h2a.1
Species: Xenopus laevis [TaxId:8355]
Database cross-references and differences (RAF-indexed):
- Chain 'H':
Compound: Histone H2B.1
Species: Xenopus laevis [TaxId:8355]
Database cross-references and differences (RAF-indexed):
- Chain 'I':
Compound: DNA strand 1 (arbitrary model sequence)
Species: synthetic, synthetic
- Chain 'J':
Compound: DNA strand 2 (arbitrary model sequence)
Species: synthetic, synthetic
- Chain 'a':
Compound: histone h3
Species: Xenopus laevis [TaxId:8355]
Database cross-references and differences (RAF-indexed):
- Chain 'b':
Compound: histone h4
Species: Xenopus laevis [TaxId:8355]
Database cross-references and differences (RAF-indexed):
- Chain 'c':
Compound: histone h2a.1
Species: Xenopus laevis [TaxId:8355]
Database cross-references and differences (RAF-indexed):
- Chain 'd':
Compound: Histone H2B.1
Species: Xenopus laevis [TaxId:8355]
Database cross-references and differences (RAF-indexed):
- Chain 'e':
Compound: histone h3
Species: Xenopus laevis [TaxId:8355]
Database cross-references and differences (RAF-indexed):
- Chain 'f':
Compound: histone h4
Species: Xenopus laevis [TaxId:8355]
Database cross-references and differences (RAF-indexed):
- Chain 'g':
Compound: histone h2a.1
Species: Xenopus laevis [TaxId:8355]
Database cross-references and differences (RAF-indexed):
- Chain 'h':
Compound: Histone H2B.1
Species: Xenopus laevis [TaxId:8355]
Database cross-references and differences (RAF-indexed):
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1zbbA (A:)
artkqtarkstggkaprkqlatkaarksapatggvkkphryrpgtvalreirryqkstel
lirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtim
pkdiqlarrirgera
Sequence, based on observed residues (ATOM records): (download)
>1zbbA (A:)
hryrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeasea
ylvalfedtnlcaihakrvtimpkdiqlarrirgera
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1zbbB (B:)
sgrgkggkglgkggakrhrkvlrdniqgitkpairrlarrggvkrisgliyeetrgvlkv
flenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg
Sequence, based on observed residues (ATOM records): (download)
>1zbbB (B:)
vdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvirdavtytehakrktvt
amdvvyalkrqgrtlygfgg
- Chain 'C':
No sequence available.
- Chain 'D':
Sequence, based on SEQRES records: (download)
>1zbbD (D:)
pepaksapapkkgskkavtktqkkdgkkrrktrkesyaiyvykvlkqvhpdtgisskams
imnsfvndvferiageasrlahynkrstitsreiqtavrlllpgelakhavsegtkavtk
ytsak
Sequence, based on observed residues (ATOM records): (download)
>1zbbD (D:)
kkgskkdgkkrrktrkesyaiyvykvlkqvhpdtgisskamsimnsfvndvferiageas
rlahynkrstitsreiqtavrlllpgelakhavsegtkavtkytsak
- Chain 'E':
Sequence, based on SEQRES records: (download)
>1zbbE (E:)
artkqtarkstggkaprkqlatkaarksapatggvkkphryrpgtvalreirryqkstel
lirklpfqrlvreiaqdfktdlrfqssavmalqeaseaylvalfedtnlcaihakrvtim
pkdiqlarrirgera
Sequence, based on observed residues (ATOM records): (download)
>1zbbE (E:)
hryrpgtvalreirryqkstellirklpfqrlvreiaqdfktdlrfqssavmalqeasea
ylvalfedtnlcaihakrvtimpkdiqlarrirgera
- Chain 'F':
Sequence, based on SEQRES records: (download)
>1zbbF (F:)
sgrgkggkglgkggakrhrkvlrdniqgitkpairrlarrggvkrisgliyeetrgvlkv
flenvirdavtytehakrktvtamdvvyalkrqgrtlygfgg
Sequence, based on observed residues (ATOM records): (download)
>1zbbF (F:)
sgrgkgkkrhrkvlrdniqgitkpairrlarrggvkrisgliyeetrgvlkvflenvird
avtytehakrktvtamdvvyalkrqgrtlygfgg
- Chain 'G':
No sequence available.
- Chain 'H':
No sequence available.
- Chain 'I':
No sequence available.
- Chain 'J':
No sequence available.
- Chain 'a':
No sequence available.
- Chain 'b':
No sequence available.
- Chain 'c':
No sequence available.
- Chain 'd':
No sequence available.
- Chain 'e':
No sequence available.
- Chain 'f':
No sequence available.
- Chain 'g':
No sequence available.
- Chain 'h':
No sequence available.