PDB entry 1zav

View 1zav on RCSB PDB site
Description: Ribosomal Protein L10-L12(NTD) Complex, Space Group P21
Class: structural protein
Keywords: ribosome structure and function, L10-L12 complex structure, L10E structure, L7/12 ribosomal stalk, thiostrepton loop of 23S rRNA, translation factor recruitment, GTPase stimulation, mechanism of translation, X-ray crystallography, rapid kinetics, cryo-electron microscopy, STRUCTURAL PROTEIN
Deposited on 2005-04-07, released 2005-07-12
The last revision prior to the SCOPe 2.07 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.226
AEROSPACI score: 0.45 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 50s ribosomal protein l10
    Species: Thermotoga maritima [TaxId:2336]
    Gene: rplJ
    Database cross-references and differences (RAF-indexed):
    • Uniprot P29394 (1-End)
      • cloning artifact (0)
    Domains in SCOPe 2.07: d1zava1, d1zava2
  • Chain 'U':
    Compound: 50S ribosomal protein L7/L12
    Species: Thermotoga maritima [TaxId:2336]
    Gene: rplL
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1zavu1
  • Chain 'V':
    Compound: 50S ribosomal protein L7/L12
    Species: Thermotoga maritima [TaxId:2336]
    Gene: rplL
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1zavv1
  • Chain 'W':
    Compound: 50S ribosomal protein L7/L12
    Species: Thermotoga maritima [TaxId:2336]
    Gene: rplL
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1zavw1
  • Chain 'X':
    Compound: 50S ribosomal protein L7/L12
    Species: Thermotoga maritima [TaxId:2336]
    Gene: rplL
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1zavx1
  • Chain 'Y':
    Compound: 50S ribosomal protein L7/L12
    Species: Thermotoga maritima [TaxId:2336]
    Gene: rplL
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1zavy1
  • Chain 'Z':
    Compound: 50S ribosomal protein L7/L12
    Species: Thermotoga maritima [TaxId:2336]
    Gene: rplL
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1zavz1
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1zavA (A:)
    vmltrqqkelivkemseifkktslilfadflgftvadltelrsrlrekygdgarfrvvkn
    tllnlalknaeyegyeeflkgptavlyvtegdpveavkiiynfykdkkadlsrlkggfle
    gkkftaeeveniaklpskeelyamlvgrvkapitglvfalsgilrnlvyvlnaikekkse
    

    Sequence, based on observed residues (ATOM records): (download)
    >1zavA (A:)
    vmltrqqkelivkemseifkktslilfadflgftvadltelrsrlrekygdgarfrvvkn
    tllnlalknaeyegyeeflkgptavlyvtegdpveavkiiynfykdkkadlsrlkggfle
    gkkftaeeveniaklpskeelyamlvgrvkapitglvfalsgilrnlvyvlnaikekk
    

  • Chain 'U':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1zavU (U:)
    mtideiieaiekltvselaelvkkledkfg
    

  • Chain 'V':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1zavV (V:)
    mtideiieaiekltvselaelvkkledkfg
    

  • Chain 'W':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1zavW (W:)
    mtideiieaiekltvselaelvkkledkfg
    

  • Chain 'X':
    Sequence, based on SEQRES records: (download)
    >1zavX (X:)
    mtideiieaiekltvselaelvkkledkfg
    

    Sequence, based on observed residues (ATOM records): (download)
    >1zavX (X:)
    mtideiieaiekltvselaelvkkledkf
    

  • Chain 'Y':
    Sequence, based on SEQRES records: (download)
    >1zavY (Y:)
    mtideiieaiekltvselaelvkkledkfg
    

    Sequence, based on observed residues (ATOM records): (download)
    >1zavY (Y:)
    mtideiieaiekltvselaelvkkledkf
    

  • Chain 'Z':
    Sequence, based on SEQRES records: (download)
    >1zavZ (Z:)
    mtideiieaiekltvselaelvkkledkfg
    

    Sequence, based on observed residues (ATOM records): (download)
    >1zavZ (Z:)
    tideiieaiekltvselaelvkkledk