PDB entry 1z9n
View 1z9n on RCSB PDB site
Description: X-Ray structure of a Cu-Zn superoxide dismutase from Haemophilus ducreyi with haem bound at the dimer interface
Class: oxidoreductase
Keywords: cu-zn sod; sod; haem, oxidoreductase
Deposited on
2005-04-03, released
2006-09-19
The last revision prior to the SCOPe 2.06 freeze date was dated
2011-10-26, with a file datestamp of
2011-10-21.
Experiment type: XRAY
Resolution: 1.5 Å
R-factor: 0.158
AEROSPACI score: 0.66
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Superoxide dismutase [Cu-Zn]
Species: Haemophilus ducreyi [TaxId:730]
Gene: SODC
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d1z9na_ - Chain 'B':
Compound: Superoxide dismutase [Cu-Zn]
Species: Haemophilus ducreyi [TaxId:730]
Gene: SODC
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d1z9nb_ - Chain 'C':
Compound: Superoxide dismutase [Cu-Zn]
Species: Haemophilus ducreyi [TaxId:730]
Gene: SODC
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d1z9nc_ - Chain 'D':
Compound: Superoxide dismutase [Cu-Zn]
Species: Haemophilus ducreyi [TaxId:730]
Gene: SODC
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d1z9nd_ - Heterogens: CU, ZN, HEM, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1z9nA (A:)
hgdhmhnhdtkmdtmskdmmsmekivvpvqqldpqngnkdvgtveitesayglvftpklh
dlahglhgfhihekpscepkekdgklvaglgagghwdpkqtqkhgypwsddahmgdlpal
fvmhdgsattpvlaprlkklaevkghslmihaggdnhsdhpaplggggprmacgvik
Sequence, based on observed residues (ATOM records): (download)
>1z9nA (A:)
ekivvpvqqldpqngnkdvgtveitesayglvftpklhdlahglhgfhihekpscepkek
dgklvaglgagghwdpkqtqkhgypwsddahmgdlpalfvmhdgsattpvlaprlkklae
vkghslmihaggdnhsdhpaplggggprmacgvik
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1z9nB (B:)
hgdhmhnhdtkmdtmskdmmsmekivvpvqqldpqngnkdvgtveitesayglvftpklh
dlahglhgfhihekpscepkekdgklvaglgagghwdpkqtqkhgypwsddahmgdlpal
fvmhdgsattpvlaprlkklaevkghslmihaggdnhsdhpaplggggprmacgvik
Sequence, based on observed residues (ATOM records): (download)
>1z9nB (B:)
ekivvpvqqldpqngnkdvgtveitesayglvftpklhdlahglhgfhihekpscepkek
dgklvaglgagghwdpkqtqkhgypwsddahmgdlpalfvmhdgsattpvlaprlkklae
vkghslmihaggdnhsdhpaplggggprmacgvik
- Chain 'C':
Sequence, based on SEQRES records: (download)
>1z9nC (C:)
hgdhmhnhdtkmdtmskdmmsmekivvpvqqldpqngnkdvgtveitesayglvftpklh
dlahglhgfhihekpscepkekdgklvaglgagghwdpkqtqkhgypwsddahmgdlpal
fvmhdgsattpvlaprlkklaevkghslmihaggdnhsdhpaplggggprmacgvik
Sequence, based on observed residues (ATOM records): (download)
>1z9nC (C:)
ekivvpvqqldpqngnkdvgtveitesayglvftpklhdlahglhgfhihekpscepkek
dgklvaglgagghwdpkqtqkhgypwsddahmgdlpalfvmhdgsattpvlaprlkklae
vkghslmihaggdnhsdhpaplggggprmacgvik
- Chain 'D':
Sequence, based on SEQRES records: (download)
>1z9nD (D:)
hgdhmhnhdtkmdtmskdmmsmekivvpvqqldpqngnkdvgtveitesayglvftpklh
dlahglhgfhihekpscepkekdgklvaglgagghwdpkqtqkhgypwsddahmgdlpal
fvmhdgsattpvlaprlkklaevkghslmihaggdnhsdhpaplggggprmacgvik
Sequence, based on observed residues (ATOM records): (download)
>1z9nD (D:)
ekivvpvqqldpqngnkdvgtveitesayglvftpklhdlahglhgfhihekpscepkek
dgklvaglgagghwdpkqtqkhgypwsddahmgdlpalfvmhdgsattpvlaprlkklae
vkghslmihaggdnhsdhpaplggggprmacgvik