PDB entry 1z3d
View 1z3d on RCSB PDB site
Description: Protein crystal growth improvement leading to the 2.5A crystallographic structure of ubiquitin-conjugating enzyme (ubc-1) from Caenorhabditis elegans
Class: ligase
Keywords: E2, Ubiquitination, Ubiquitin-conjugating, crystal growth, Structural Genomics, PSI, Protein Structure Initiative, Southeast Collaboratory for Structural Genomics, SECSG, LIGASE
Deposited on
2005-03-11, released
2005-03-22
The last revision prior to the SCOPe 2.03 freeze date was dated
2009-02-24, with a file datestamp of
2009-02-03.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.242
AEROSPACI score: 0.29
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Ubiquitin-conjugating enzyme E2 1
Species: Caenorhabditis elegans [TaxId:6239]
Gene: ubc-1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d1z3da_ - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1z3dA (A:)
gshmttpsrrrlmrdfkklqedppagvsgaptedniltweaiifgpqetpfedgtfklsl
efteeypnkpptvkfiskmfhpnvyadgsicldilqnrwsptydvaailtsiqslldepn
pnspanslaaqlyqenrreyekrvqqiveqswlnfge
Sequence, based on observed residues (ATOM records): (download)
>1z3dA (A:)
ttpsrrrlmrdfkklqedppagvsgaptedniltweaiifgpqetpfedgtfklslefte
eypnkpptvkfiskmfhpnvyadgsicldilqnrwsptydvaailtsiqslldepnpnsp
anslaaqlyqenrreyekrvqqiveqswlnf