PDB entry 1yyr

View 1yyr on RCSB PDB site
Description: Y305F Trichodiene Synthase: Complex With Mg, Pyrophosphate, and (4R)-7-azabisabolene
Class: lyase
Keywords: terpenoid cyclase fold, site-directed mutant, Pyrophosphate, (4R)-7-azabisabolene, LYASE
Deposited on 2005-02-25, released 2005-03-29
The last revision prior to the SCOPe 2.07 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.219
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: trichodiene synthase
    Species: Fusarium sporotrichioides [TaxId:5514]
    Gene: TRI5
    Database cross-references and differences (RAF-indexed):
    • Uniprot P13513
      • engineered (304)
    Domains in SCOPe 2.07: d1yyra_
  • Chain 'B':
    Compound: trichodiene synthase
    Species: Fusarium sporotrichioides [TaxId:5514]
    Gene: TRI5
    Database cross-references and differences (RAF-indexed):
    • Uniprot P13513
      • engineered (304)
    Domains in SCOPe 2.07: d1yyrb_
  • Heterogens: MG, SAZ, POP, EDO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1yyrA (A:)
menfpteyflnttvrlleyiryrdsnytreerienlhyaynkaahhfaqprqqqllkvdp
krlqaslqtivgmvvyswakvskecmadlsihytytlvlddskddpyptmvnyfddlqag
reqahpwwalvnehfpnvlrhfgpfcslnlirstldffegcwieqynfggfpgshdypqf
lrrmnglghcvgaslwpkeqfnerslfleitsaiaqmenwmvwvndlmsfykefdderdq
islvknyvvsdeislhealekltqdtlhsskqmvavfsdkdpqvmdtiecfmhgyvtwhl
cdrrfrlseiyekvkeektedaqkfckfyeqaanvgavspsewayppvaqlanvrskdvk
evqkpflssielve

    Sequence, based on observed residues (ATOM records): (download) 
    >1yyrA (A:)
enfpteyflnttvrlleyiryrdsnytreerienlhyaynkaahhfaqprqqqllkvdpk
rlqaslqtivgmvvyswakvskecmadlsihytytlvlddskddpyptmvnyfddlqagr
eqahpwwalvnehfpnvlrhfgpfcslnlirstldffegcwieqynfggfpgshdypqfl
rrmnglghcvgaslwpkeqfnerslfleitsaiaqmenwmvwvndlmsfykefdderdqi
slvknyvvsdeislhealekltqdtlhsskqmvavfsdkdpqvmdtiecfmhgyvtwhlc
drrfrlseiyekvkeektedaqkfckfyeqaanvgavspsewayppvaqlanv

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1yyrB (B:)
menfpteyflnttvrlleyiryrdsnytreerienlhyaynkaahhfaqprqqqllkvdp
krlqaslqtivgmvvyswakvskecmadlsihytytlvlddskddpyptmvnyfddlqag
reqahpwwalvnehfpnvlrhfgpfcslnlirstldffegcwieqynfggfpgshdypqf
lrrmnglghcvgaslwpkeqfnerslfleitsaiaqmenwmvwvndlmsfykefdderdq
islvknyvvsdeislhealekltqdtlhsskqmvavfsdkdpqvmdtiecfmhgyvtwhl
cdrrfrlseiyekvkeektedaqkfckfyeqaanvgavspsewayppvaqlanvrskdvk
evqkpflssielve

    Sequence, based on observed residues (ATOM records): (download) 
    >1yyrB (B:)
nfpteyflnttvrlleyiryrdsnytreerienlhyaynkaahhfaqprqqqllkvdpkr
lqaslqtivgmvvyswakvskecmadlsihytytlvlddskddpyptmvnyfddlqagre
qahpwwalvnehfpnvlrhfgpfcslnlirstldffegcwieqynfggfpgshdypqflr
rmnglghcvgaslwpkeqfnerslfleitsaiaqmenwmvwvndlmsfykefdderdqis
lvknyvvsdeislhealekltqdtlhsskqmvavfsdkdpqvmdtiecfmhgyvtwhlcd
rrfrlseiyekvkeektedaqkfckfyeqaanvgavspsewayppvaqlanv