PDB entry 1yw3
View 1yw3 on RCSB PDB site
Description: Crystal Structure of the Putative Nitroreductase in Complex with FMN from Streptococcus mutans, Northeast Structural Genomics Target SmR5.
Class: structural genomics, unknown function
Keywords: alpha-beta protein, Structural Genomics, PSI, Protein Structure Initiative, Northeast Structural Genomics Consortium, NESG
Deposited on
2005-02-16, released
2005-03-01
The last revision prior to the SCOPe 2.08 freeze date was dated
2006-10-03, with a file datestamp of
2007-06-01.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.223
AEROSPACI score: 0.33
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Hypothetical protein SMU.260
Species: Streptococcus mutans UA159
Gene: GeneID:1027848
Database cross-references and differences (RAF-indexed):
- Uniprot Q8DW21 (Start-199)
- modified residue (144)
- modified residue (169)
- modified residue (188)
- cloning artifact (200)
Domains in SCOPe 2.08: d1yw3a1, d1yw3a2 - Chain 'B':
Compound: Hypothetical protein SMU.260
Species: Streptococcus mutans UA159
Gene: GeneID:1027848
Database cross-references and differences (RAF-indexed):
- Uniprot Q8DW21 (Start-199)
- modified residue (144)
- modified residue (169)
- modified residue (188)
- cloning artifact (200-201)
Domains in SCOPe 2.08: d1yw3b1, d1yw3b2 - Chain 'C':
Compound: Hypothetical protein SMU.260
Species: Streptococcus mutans UA159
Gene: GeneID:1027848
Database cross-references and differences (RAF-indexed):
- Uniprot Q8DW21 (Start-199)
- modified residue (144)
- modified residue (169)
- modified residue (188)
- cloning artifact (200-201)
Domains in SCOPe 2.08: d1yw3c1, d1yw3c2 - Chain 'D':
Compound: Hypothetical protein SMU.260
Species: Streptococcus mutans UA159
Gene: GeneID:1027848
Database cross-references and differences (RAF-indexed):
- Uniprot Q8DW21 (Start-199)
- modified residue (144)
- modified residue (169)
- modified residue (188)
- cloning artifact (200)
Domains in SCOPe 2.08: d1yw3d1, d1yw3d2 - Chain 'E':
Compound: Hypothetical protein SMU.260
Species: Streptococcus mutans UA159
Gene: GeneID:1027848
Database cross-references and differences (RAF-indexed):
- Uniprot Q8DW21 (Start-199)
- modified residue (144)
- modified residue (169)
- modified residue (188)
- cloning artifact (200-201)
Domains in SCOPe 2.08: d1yw3e1, d1yw3e2 - Chain 'F':
Compound: Hypothetical protein SMU.260
Species: Streptococcus mutans UA159
Gene: GeneID:1027848
Database cross-references and differences (RAF-indexed):
- Uniprot Q8DW21 (Start-199)
- modified residue (144)
- modified residue (169)
- modified residue (188)
Domains in SCOPe 2.08: d1yw3f_ - Heterogens: FMN, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1yw3A (A:)
msnfldlqkqrrsiyalgktvdlskaelvaliqnaikqapsafnsqtsralvlfgqdsqd
fwnkiayselekvtpaeafagtkaklesfaagvgtillfedqavvrnleenfplyaenfq
pwseqahgialyaiwlalaeqnigmsvqhynplvdaqvaekydlptnwkmraqipfgsie
apagekefmadqerfkvfgdlehhhhhh
Sequence, based on observed residues (ATOM records): (download)
>1yw3A (A:)
snfldlqkqrrsiyalgktvdlskaelvaliqnaikqapsafnsqtsralvlfgqdsqdf
wnkiayselekvtpaeafagtkaklesfaagvgtillfedqavvrnleenfplyaenfqp
wseqahgialyaiwlalaeqnigmsvqhynplvdaqvaekydlptnwkmraqipfgsiea
pagekefmadqerfkvfgdl
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1yw3B (B:)
msnfldlqkqrrsiyalgktvdlskaelvaliqnaikqapsafnsqtsralvlfgqdsqd
fwnkiayselekvtpaeafagtkaklesfaagvgtillfedqavvrnleenfplyaenfq
pwseqahgialyaiwlalaeqnigmsvqhynplvdaqvaekydlptnwkmraqipfgsie
apagekefmadqerfkvfgdlehhhhhh
Sequence, based on observed residues (ATOM records): (download)
>1yw3B (B:)
snfldlqkqrrsiyalgktvdlskaelvaliqnaikqapsafnsqtsralvlfgqdsqdf
wnkiayselekvtpaeafagtkaklesfaagvgtillfedqavvrnleenfplyaenfqp
wseqahgialyaiwlalaeqnigmsvqhynplvdaqvaekydlptnwkmraqipfgsiea
pagekefmadqerfkvfgdle
- Chain 'C':
Sequence, based on SEQRES records: (download)
>1yw3C (C:)
msnfldlqkqrrsiyalgktvdlskaelvaliqnaikqapsafnsqtsralvlfgqdsqd
fwnkiayselekvtpaeafagtkaklesfaagvgtillfedqavvrnleenfplyaenfq
pwseqahgialyaiwlalaeqnigmsvqhynplvdaqvaekydlptnwkmraqipfgsie
apagekefmadqerfkvfgdlehhhhhh
Sequence, based on observed residues (ATOM records): (download)
>1yw3C (C:)
snfldlqkqrrsiyalgktvdlskaelvaliqnaikqapsafnsqtsralvlfgqdsqdf
wnkiayselekvtpaeafagtkaklesfaagvgtillfedqavvrnleenfplyaenfqp
wseqahgialyaiwlalaeqnigmsvqhynplvdaqvaekydlptnwkmraqipfgsiea
pagekefmadqerfkvfgdle
- Chain 'D':
Sequence, based on SEQRES records: (download)
>1yw3D (D:)
msnfldlqkqrrsiyalgktvdlskaelvaliqnaikqapsafnsqtsralvlfgqdsqd
fwnkiayselekvtpaeafagtkaklesfaagvgtillfedqavvrnleenfplyaenfq
pwseqahgialyaiwlalaeqnigmsvqhynplvdaqvaekydlptnwkmraqipfgsie
apagekefmadqerfkvfgdlehhhhhh
Sequence, based on observed residues (ATOM records): (download)
>1yw3D (D:)
snfldlqkqrrsiyalgktvdlskaelvaliqnaikqapsafnsqtsralvlfgqdsqdf
wnkiayselekvtpaeafagtkaklesfaagvgtillfedqavvrnleenfplyaenfqp
wseqahgialyaiwlalaeqnigmsvqhynplvdaqvaekydlptnwkmraqipfgsiea
pagekefmadqerfkvfgdl
- Chain 'E':
Sequence, based on SEQRES records: (download)
>1yw3E (E:)
msnfldlqkqrrsiyalgktvdlskaelvaliqnaikqapsafnsqtsralvlfgqdsqd
fwnkiayselekvtpaeafagtkaklesfaagvgtillfedqavvrnleenfplyaenfq
pwseqahgialyaiwlalaeqnigmsvqhynplvdaqvaekydlptnwkmraqipfgsie
apagekefmadqerfkvfgdlehhhhhh
Sequence, based on observed residues (ATOM records): (download)
>1yw3E (E:)
snfldlqkqrrsiyalgktvdlskaelvaliqnaikqapsafnsqtsralvlfgqdsqdf
wnkiayselekvtpaeafagtkaklesfaagvgtillfedqavvrnleenfplyaenfqp
wseqahgialyaiwlalaeqnigmsvqhynplvdaqvaekydlptnwkmraqipfgsiea
pagekefmadqerfkvfgdle
- Chain 'F':
Sequence, based on SEQRES records: (download)
>1yw3F (F:)
msnfldlqkqrrsiyalgktvdlskaelvaliqnaikqapsafnsqtsralvlfgqdsqd
fwnkiayselekvtpaeafagtkaklesfaagvgtillfedqavvrnleenfplyaenfq
pwseqahgialyaiwlalaeqnigmsvqhynplvdaqvaekydlptnwkmraqipfgsie
apagekefmadqerfkvfgdlehhhhhh
Sequence, based on observed residues (ATOM records): (download)
>1yw3F (F:)
snfldlqkqrrsiyalgktvdlskaelvaliqnaikqapsafnsqtsralvlfgqdsqdf
wnkiayselekvtpaeafagtkaklesfaagvgtillfedqavvrnleenfplyaenfqp
wseqahgialyaiwlalaeqnigmsvqhynplvdaqvaekydlptnwkmraqipfgsiea
pagekefmadqerfkvfgd