PDB entry 1yw0

View 1yw0 on RCSB PDB site
Description: Crystal structure of the tryptophan 2,3-dioxygenase from Xanthomonas campestris. Northeast Structural Genomics Target XcR13.
Class: oxidoreductase
Keywords: tryptophan, dioxygenase, NESG, Structural Genomics, PSI, Protein Structure Initiative, Northeast Structural Genomics Consortium
Deposited on 2005-02-16, released 2005-03-15
The last revision prior to the SCOP 1.73 freeze date was dated 2005-05-03, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: 0.25
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Tryptophan 2,3-dioxygenase
    Species: Xanthomonas campestris pv. campestris str. ATCC 33913
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8PDA8 (0-End)
      • modified residue (26)
      • modified residue (91)
      • modified residue (122)
      • modified residue (218)
      • modified residue (222)
    Domains in SCOP 1.73: d1yw0a1
  • Chain 'B':
    Compound: Tryptophan 2,3-dioxygenase
    Species: Xanthomonas campestris pv. campestris str. ATCC 33913
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8PDA8 (0-End)
      • modified residue (26)
      • modified residue (91)
      • modified residue (122)
      • modified residue (218)
      • modified residue (222)
    Domains in SCOP 1.73: d1yw0b1
  • Chain 'C':
    Compound: Tryptophan 2,3-dioxygenase
    Species: Xanthomonas campestris pv. campestris str. ATCC 33913
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8PDA8 (0-End)
      • modified residue (26)
      • modified residue (91)
      • modified residue (122)
      • modified residue (218)
      • modified residue (222)
    Domains in SCOP 1.73: d1yw0c1
  • Chain 'D':
    Compound: Tryptophan 2,3-dioxygenase
    Species: Xanthomonas campestris pv. campestris str. ATCC 33913
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8PDA8 (0-End)
      • modified residue (26)
      • modified residue (91)
      • modified residue (122)
      • modified residue (218)
      • modified residue (222)
    Domains in SCOP 1.73: d1yw0d1
  • Heterogens: MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1yw0A (A:)
tyggylrldqllsaqqplsepahhdemlfiiqhqtselwlkllahelraaivhlqrdevw
qcrkvlarskqvlrqlteqwsvletltpseymgfrdvlgpssgfqslqyryiefllgnkn
pqmlqvfaydpagqarlrevleapslyeeflrylarfghaipqqyqardwtaahvaddtl
rpvferiyentdrywreyslcedlvdvetqfqlwrfrhmrtvmrvigfkrgtggssgvgf
lqqalaltffpelfdvrtsvgvdnrppqgsadagkr

    Sequence, based on observed residues (ATOM records): (download) 
    >1yw0A (A:)
tyggylrldqllsaqqplsepahhdemlfiiqhqtselwlkllahelraaivhlqrdevw
qcrkvlarskqvlrqlteqwsvletltpseymgfrdvlgfqslqyryiefllgnknpqml
qvfaydpagqarlrevleapslyeeflrylarfghaipqqyqardwtaahvaddtlrpvf
eriyentdrywreyslcedlvdvetqfqlwrfrhmrtvmrvigfalaltffpelfdvrts
vgv

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1yw0B (B:)
tyggylrldqllsaqqplsepahhdemlfiiqhqtselwlkllahelraaivhlqrdevw
qcrkvlarskqvlrqlteqwsvletltpseymgfrdvlgpssgfqslqyryiefllgnkn
pqmlqvfaydpagqarlrevleapslyeeflrylarfghaipqqyqardwtaahvaddtl
rpvferiyentdrywreyslcedlvdvetqfqlwrfrhmrtvmrvigfkrgtggssgvgf
lqqalaltffpelfdvrtsvgvdnrppqgsadagkr

    Sequence, based on observed residues (ATOM records): (download) 
    >1yw0B (B:)
tyggylrldqllsaqqplsepahhdemlfiiqhqtselwlkllahelraaivhlqrdevw
qcrkvlarskqvlrqlteqwsvletltpseymgfrdvlgfqslqyryiefllgnknpqml
qvfaydpagqarlrevleapslyeeflrylarfghaipqqyqardwtaahvaddtlrpvf
eriyentdrywreyslcedlvdvetqfqlwrfrhmrtvmrvigflaltffpelfdvrtsv
gv

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1yw0C (C:)
tyggylrldqllsaqqplsepahhdemlfiiqhqtselwlkllahelraaivhlqrdevw
qcrkvlarskqvlrqlteqwsvletltpseymgfrdvlgpssgfqslqyryiefllgnkn
pqmlqvfaydpagqarlrevleapslyeeflrylarfghaipqqyqardwtaahvaddtl
rpvferiyentdrywreyslcedlvdvetqfqlwrfrhmrtvmrvigfkrgtggssgvgf
lqqalaltffpelfdvrtsvgvdnrppqgsadagkr

    Sequence, based on observed residues (ATOM records): (download) 
    >1yw0C (C:)
tyggylrldqllsaqqplsepahhdemlfiiqhqtselwlkllahelraaivhlqrdevw
qcrkvlarskqvlrqlteqwsvletltpseymgfrdvlgfqslqyryiefllgnknpqml
qvfaydpagqarlrevleapslyeeflrylarfghaipqqyqardwtaahvaddtlrpvf
eriyentdrywreyslcedlvdvetqfqlwrfrhmrtvmrvigfalaltffpelfdvrts
vgv

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1yw0D (D:)
tyggylrldqllsaqqplsepahhdemlfiiqhqtselwlkllahelraaivhlqrdevw
qcrkvlarskqvlrqlteqwsvletltpseymgfrdvlgpssgfqslqyryiefllgnkn
pqmlqvfaydpagqarlrevleapslyeeflrylarfghaipqqyqardwtaahvaddtl
rpvferiyentdrywreyslcedlvdvetqfqlwrfrhmrtvmrvigfkrgtggssgvgf
lqqalaltffpelfdvrtsvgvdnrppqgsadagkr

    Sequence, based on observed residues (ATOM records): (download) 
    >1yw0D (D:)
tyggylrldqllsaqqplsepahhdemlfiiqhqtselwlkllahelraaivhlqrdevw
qcrkvlarskqvlrqlteqwsvletltpseymgfrdvlgfqslqyryiefllgnknpqml
qvfaydpagqarlrevleapslyeeflrylarfghaipqqyqardwtaahvaddtlrpvf
eriyentdrywreyslcedlvdvetqfqlwrfrhmrtvmrvigfalaltffpelfdvrts
vgv