PDB entry 1yvy

View 1yvy on RCSB PDB site
Description: Crystal strucutre of Anaerobiospirillum succiniciproducens phosphoenolpyruvate carboxykinase
Class: lyase
Keywords: p-loop, domain movement, kinase, succinate, LYASE
Deposited on 2005-02-16, released 2005-07-26
The last revision prior to the SCOPe 2.07 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.35 Å
R-factor: 0.221
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Phosphoenolpyruvate carboxykinase [ATP]
    Species: Anaerobiospirillum succiniciproducens [TaxId:13335]
    Gene: pckA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1yvya1, d1yvya2
  • Chain 'B':
    Compound: Phosphoenolpyruvate carboxykinase [ATP]
    Species: Anaerobiospirillum succiniciproducens [TaxId:13335]
    Gene: pckA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1yvyb1, d1yvyb2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1yvyA (A:)
mslseslakygitgatnivhnpsheelfaaetqaslegfekgtvtemgavnvmtgvytgr
spkdkfivkneaskeiwwtsdefkndnkpvteeawaqlkalagkelsnkplyvvdlfcga
nentrlkirfvmevawqahfvtnmfirpteeelkgfepdfvvlnaskakvenfkelglns
etavvfnlaekmqiilntwyggemkkgmfsmmnfylplqgiaamhcsantdlegkntaif
fglsgtgkttlstdpkrlligddehgwdddgvfnfeggcyakvinlskenepdiwgaikr
nallenvtvdangkvdfadksvtentrvsypifhiknivkpvskapaakrviflsadafg
vlppvsilskeqtkyyflsgftaklagtergiteptptfsscfgaafltlpptkyaevlv
krmeasgakaylvntgwngtgkrisikdtrgiidaildgsidtantatipyfnftvptel
kgvdtkildprntyadasewevkakdlaerfqknfkkfeslggdlvkagpql

    Sequence, based on observed residues (ATOM records): (download) 
    >1yvyA (A:)
slseslakygitgatnivhnpsheelfaaetqaslegfekgtvtemgavnvmtgvytgrs
pkdkfivkneaskeiwwtsdefkndnkpvteeawaqlkalagkelsnkplyvvdlfcgan
entrlkirfvmevawqahfvtnmfirpteeelkgfepdfvvlnaskakvenfkelglnse
tavvfnlaekmqiilntwyggemkkgmfsmmnfylplqgiaamhcsantdlegkntaiff
glsgtgkttlstdpkrlligddehgwdddgvfnfeggcyakvinlskenepdiwgaikrn
allenvtvdangkvdfadksvtentrvsypifhiknivkpvskapaakrviflsadafgv
lppvsilskeqtkyyflsgftakptptfsscfgaafltlpptkyaevlvkrmeasgakay
lvntgwngtgkrisikdtrgiidaildgsidtantatipyfnftvptelkgvdtkildpr
ntyadasewevkakdlaerfqknfkkf

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1yvyB (B:)
mslseslakygitgatnivhnpsheelfaaetqaslegfekgtvtemgavnvmtgvytgr
spkdkfivkneaskeiwwtsdefkndnkpvteeawaqlkalagkelsnkplyvvdlfcga
nentrlkirfvmevawqahfvtnmfirpteeelkgfepdfvvlnaskakvenfkelglns
etavvfnlaekmqiilntwyggemkkgmfsmmnfylplqgiaamhcsantdlegkntaif
fglsgtgkttlstdpkrlligddehgwdddgvfnfeggcyakvinlskenepdiwgaikr
nallenvtvdangkvdfadksvtentrvsypifhiknivkpvskapaakrviflsadafg
vlppvsilskeqtkyyflsgftaklagtergiteptptfsscfgaafltlpptkyaevlv
krmeasgakaylvntgwngtgkrisikdtrgiidaildgsidtantatipyfnftvptel
kgvdtkildprntyadasewevkakdlaerfqknfkkfeslggdlvkagpql

    Sequence, based on observed residues (ATOM records): (download) 
    >1yvyB (B:)
slseslakygitgatnivhnpsheelfaaetqaslegfekgtvtemgavnvmtgvytgrs
pkdkfivkneaskeiwwtsdefkndnkpvteeawaqlkalagkelsnkplyvvdlfcgan
entrlkirfvmevawqahfvtnmfirpteeelkgfepdfvvlnaskakvenfkelglnse
tavvfnlaekmqiilntwyggemkkgmfsmmnfylplqgiaamhcsantdlegkntaiff
glsgtgkttlstdpkrlligddehgwdddgvfnfeggcyakvinlskenepdiwgaikrn
allenvtvdangkvdfadksvtentrvsypifhiknivkpvskapaakrviflsadafgv
lppvsilskeqtkyyflsgftaptfsscfgaafltlpptkyaevlvkrmeasgakaylvn
tgwngtgkrisikdtrgiidaildgsidtantatipyfnftvptelkgvdtkildprnty
adasewevkakdlaerfqknfkkf