PDB entry 1yu6

View 1yu6 on RCSB PDB site
Description: Crystal Structure of the Subtilisin Carlsberg:OMTKY3 Complex
Class: hydrolase
Keywords: protein proteinase inhibitor, protease, HYDROLASE
Deposited on 2005-02-11, released 2005-05-03
The last revision prior to the SCOPe 2.07 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 1.55 Å
R-factor: 0.192
AEROSPACI score: 0.61 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: subtilisin carlsberg
    Species: Bacillus licheniformis [TaxId:1402]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P00780 (Start-274)
      • conflict (154)
      • conflict (160)
      • conflict (224)
    Domains in SCOPe 2.07: d1yu6a_
  • Chain 'B':
    Compound: subtilisin carlsberg
    Species: Bacillus licheniformis [TaxId:1402]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P00780 (Start-274)
      • conflict (154)
      • conflict (160)
      • conflict (224)
    Domains in SCOPe 2.07: d1yu6b_
  • Chain 'C':
    Compound: Ovomucoid
    Species: Meleagris gallopavo [TaxId:9103]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1yu6c_
  • Chain 'D':
    Compound: Ovomucoid
    Species: Meleagris gallopavo [TaxId:9103]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1yu6d_
  • Heterogens: CA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1yu6A (A:)
    maqtvpygiplikadkvqaqgfkganvkvavldtgiqashpdlnvvggasfvageayntd
    gnghgthvagtvaaldnttgvlgvapsvslyavkvlnssgsgsysgivsgiewattngmd
    vinmslggasgstamkqavdnayargvvvvaaagnsgnsgstntigypakydsviavgav
    dsnsnrasfssvgaelevmapgagvystyptntyatlngtsmasphvagaaalilskhpn
    lsasqvrnrlsstatylgssfyygkglinveaaaq
    

    Sequence, based on observed residues (ATOM records): (download)
    >1yu6A (A:)
    aqtvpygiplikadkvqaqgfkganvkvavldtgiqashpdlnvvggasfvageayntdg
    nghgthvagtvaaldnttgvlgvapsvslyavkvlnssgsgsysgivsgiewattngmdv
    inmslggasgstamkqavdnayargvvvvaaagnsgnsgstntigypakydsviavgavd
    snsnrasfssvgaelevmapgagvystyptntyatlngtsmasphvagaaalilskhpnl
    sasqvrnrlsstatylgssfyygkglinveaaaq
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >1yu6B (B:)
    maqtvpygiplikadkvqaqgfkganvkvavldtgiqashpdlnvvggasfvageayntd
    gnghgthvagtvaaldnttgvlgvapsvslyavkvlnssgsgsysgivsgiewattngmd
    vinmslggasgstamkqavdnayargvvvvaaagnsgnsgstntigypakydsviavgav
    dsnsnrasfssvgaelevmapgagvystyptntyatlngtsmasphvagaaalilskhpn
    lsasqvrnrlsstatylgssfyygkglinveaaaq
    

    Sequence, based on observed residues (ATOM records): (download)
    >1yu6B (B:)
    aqtvpygiplikadkvqaqgfkganvkvavldtgiqashpdlnvvggasfvageayntdg
    nghgthvagtvaaldnttgvlgvapsvslyavkvlnssgsgsysgivsgiewattngmdv
    inmslggasgstamkqavdnayargvvvvaaagnsgnsgstntigypakydsviavgavd
    snsnrasfssvgaelevmapgagvystyptntyatlngtsmasphvagaaalilskhpnl
    sasqvrnrlsstatylgssfyygkglinveaaaq
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >1yu6C (C:)
    vevdcsrfpnttneegkdvlvctedlrpicgtdgvthsecllcaynieygtniskehdge
    creavpmdcsrypnttseegkvmilcnkalnpvcgtdgvtydnecvlcahnleqgtsvgk
    khdgecrkelaavsvdcseypkpactleyrplcgsdnktygnkcnfcnavvesngtltls
    hfgkc
    

    Sequence, based on observed residues (ATOM records): (download)
    >1yu6C (C:)
    vdcseypkpactleyrplcgsdnktygnkcnfcnavvesngtltlshfgkc
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >1yu6D (D:)
    vevdcsrfpnttneegkdvlvctedlrpicgtdgvthsecllcaynieygtniskehdge
    creavpmdcsrypnttseegkvmilcnkalnpvcgtdgvtydnecvlcahnleqgtsvgk
    khdgecrkelaavsvdcseypkpactleyrplcgsdnktygnkcnfcnavvesngtltls
    hfgkc
    

    Sequence, based on observed residues (ATOM records): (download)
    >1yu6D (D:)
    dcseypkpactleyrplcgsdnktygnkcnfcnavvesngtltlshfgkc