PDB entry 1ysd

View 1ysd on RCSB PDB site
Description: Yeast Cytosine Deaminase Double Mutant
Class: hydrolase
Keywords: HYDROLASE, Cytosine deaminase
Deposited on 2005-02-08, released 2005-05-17
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.163
AEROSPACI score: 0.51 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Cytosine deaminase
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: fcy1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q12178
      • engineered (25)
      • engineered (142)
    Domains in SCOPe 2.08: d1ysda1
  • Chain 'B':
    Compound: Cytosine deaminase
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: fcy1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q12178 (3-160)
      • cloning artifact (0-2)
      • engineered (25)
      • engineered (142)
    Domains in SCOPe 2.08: d1ysdb2, d1ysdb3
  • Heterogens: ZN, CA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1ysdA (A:)
    gssmvtggmaskwdqkgmdiayeeallgykeggvpiggclinnkdgsvlgrghnmrfqkg
    satlhgeistlencgrlegkvykdttlyttlspcdmctgaiimygiprcvvgenvnfksk
    gekylqtrghevvvvdderckklmkqfiderpqdwfedige
    

    Sequence, based on observed residues (ATOM records): (download)
    >1ysdA (A:)
    tggmaskwdqkgmdiayeeallgykeggvpiggclinnkdgsvlgrghnmrfqkgsatlh
    geistlencgrlegkvykdttlyttlspcdmctgaiimygiprcvvgenvnfkskgekyl
    qtrghevvvvdderckklmkqfiderpqdwfedige
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1ysdB (B:)
    gssmvtggmaskwdqkgmdiayeeallgykeggvpiggclinnkdgsvlgrghnmrfqkg
    satlhgeistlencgrlegkvykdttlyttlspcdmctgaiimygiprcvvgenvnfksk
    gekylqtrghevvvvdderckklmkqfiderpqdwfedige