PDB entry 1yny

View 1yny on RCSB PDB site
Description: Molecular Structure of D-Hydantoinase from a Bacillus sp. AR9: Evidence for mercury inhibition
Class: hydrolase
Keywords: TIM-barrel; hydantoinase; binuclear metal-binding; hydrolase, HYDROLASE
Deposited on 2005-01-26, released 2005-03-01
The last revision prior to the SCOPe 2.03 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.199
AEROSPACI score: 0.36 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: D-hydantoinase
    Species: Bacillus sp. [TaxId:301298]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d1ynya1, d1ynya2
  • Chain 'B':
    Compound: D-hydantoinase
    Species: Bacillus sp. [TaxId:301298]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d1ynyb1, d1ynyb2
  • Heterogens: MN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1ynyA (A:)
mkkwirggtvvtaadtyqadvliegervvaighqlsvngaeeidatgcyvipggidphth
ldmpfggtvtaddfftgtraaafggttsivdfcltkkgeslksaiatwhekargkavidy
gfhlmiaeandqvleelesvissegitslkvfmayknvfqaddetlfktlvkakelgalv
qvhaengdvldyltkkalaegntdpiyhaytrppeaegeatgraialtalagsqlyvvhv
scasavqriaearekgwnvygetcpqylaldvsimdqpdfegakyvwspplrekwnqevl
wsalkngilqtvgsdhcpfnfrgqkelgrgdftkipnggpliedrltilysegvrqgris
lnqfvdisstkaaklfgmfprkgtiavgsdadivifdphvkrtlsvethhmnvdynpfeg
mevygevvsvlsrgsfvvrdkqfvgqagsgqyikrttfeqp

    Sequence, based on observed residues (ATOM records): (download) 
    >1ynyA (A:)
kkwirggtvvtaadtyqadvliegervvaighqgaeeidatgcyvipggidphthldmpf
ggtvtaddfftgtraaafggttsivdfcltkkgeslksaiatwhekargkavidygfhlm
iaeandqvleelesvissegitslkvfmayknvfqaddetlfktlvkakelgalvqvhae
ngdvldyltkkalaegntdpiyhaytrppeaegeatgraialtalagsqlyvvhvscasa
vqriaearekgwnvygetcpqylaldvsimdqpdfegakyvwspplrekwnqevlwsalk
ngilqtvgsdhcpfnfrgqkelgrgdftkipnggpliedrltilysegvrqgrislnqfv
disstkaaklfgmfprkgtiavgsdadivifdphvkrtlsvethhmnvdynpfegmevyg
evvsvlsrgsfvvrdkqfvgqagsgqyikrttfeq

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1ynyB (B:)
mkkwirggtvvtaadtyqadvliegervvaighqlsvngaeeidatgcyvipggidphth
ldmpfggtvtaddfftgtraaafggttsivdfcltkkgeslksaiatwhekargkavidy
gfhlmiaeandqvleelesvissegitslkvfmayknvfqaddetlfktlvkakelgalv
qvhaengdvldyltkkalaegntdpiyhaytrppeaegeatgraialtalagsqlyvvhv
scasavqriaearekgwnvygetcpqylaldvsimdqpdfegakyvwspplrekwnqevl
wsalkngilqtvgsdhcpfnfrgqkelgrgdftkipnggpliedrltilysegvrqgris
lnqfvdisstkaaklfgmfprkgtiavgsdadivifdphvkrtlsvethhmnvdynpfeg
mevygevvsvlsrgsfvvrdkqfvgqagsgqyikrttfeqp

    Sequence, based on observed residues (ATOM records): (download) 
    >1ynyB (B:)
kkwirggtvvtaadtyqadvliegervvaighqlsvngaeeidatgcyvipggidphthl
dmpfggtvtaddfftgtraaafggttsivdfcltkkgeslksaiatwhekargkavidyg
fhlmiaeandqvleelesvissegitslkvfmayknvfqaddetlfktlvkakelgalvq
vhaengdvldyltkkalaegntdpiyhaytrppeaegeatgraialtalagsqlyvvhvs
casavqriaearekgwnvygetcpqylaldvsimdqpdfegakyvwspplrekwnqevlw
salkngilqtvgsdhcpfnfrgqkelgrgdftkipnggpliedrltilysegvrqgrisl
nqfvdisstkaaklfgmfprkgtiavgsdadivifdphvkrtlsvethhmnvdynpfegm
evygevvsvlsrgsfvvrdkqfvgqagsgqyikrttfeq