PDB entry 1ymh
View 1ymh on RCSB PDB site
Description: anti-HCV Fab 19D9D6 complexed with protein L (PpL) mutant A66W
Class: immune system
Keywords: Engineering of Crystal contacts, PpL-Fab complex, IMMUNE SYSTEM
Deposited on
2005-01-21, released
2005-05-31
The last revision prior to the SCOPe 2.03 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-08.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: 0.228
AEROSPACI score: 0.22
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Fab 16D9D6, light chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d1ymha1, d1ymha2 - Chain 'B':
Compound: Fab 16D9D6, heavy chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d1ymhb1, d1ymhb2 - Chain 'C':
Compound: Fab 16D9D6, light chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d1ymhc1, d1ymhc2 - Chain 'D':
Compound: Fab 16D9D6, heavy chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d1ymhd1, d1ymhd2 - Chain 'E':
Compound: protein l
Species: Finegoldia magna [TaxId:334413]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d1ymhe_ - Chain 'F':
Compound: protein l
Species: Finegoldia magna [TaxId:334413]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d1ymhf_ - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>1ymhA (A:)
divmsqspsslavsagekvtmsckssqsllnsrtrknylawyqqkpgqspkvliywastr
esgvpdrftgrgsgtdftltissvqaedqavyyckqayippltfgagtklelkradaapt
vsifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstys
msstltltkdeyerhnsytceathktstspivksfnrnec
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>1ymhB (B:)
qiqlvqsgpelkkpgetvkisckasgytftdfsmhwvnqapgkglnwmgwvntetgepty
addfkgrfafsletsastaylqinslknedtatyfcarfllrqyfdvwgagttvtvssak
ttppsvyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdly
tlsssvtvpsstwpsetvtcnvahpasstkvdkkivpr
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>1ymhC (C:)
divmsqspsslavsagekvtmsckssqsllnsrtrknylawyqqkpgqspkvliywastr
esgvpdrftgrgsgtdftltissvqaedqavyyckqayippltfgagtklelkradaapt
vsifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstys
msstltltkdeyerhnsytceathktstspivksfnrnec
- Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)
>1ymhD (D:)
qiqlvqsgpelkkpgetvkisckasgytftdfsmhwvnqapgkglnwmgwvntetgepty
addfkgrfafsletsastaylqinslknedtatyfcarfllrqyfdvwgagttvtvssak
ttppsvyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdly
tlsssvtvpsstwpsetvtcnvahpasstkvdkkivpr
- Chain 'E':
Sequence; same for both SEQRES and ATOM records: (download)
>1ymhE (E:)
keevtikvnlifadgkiqtaefkgtfeeataeayryadllakvngeytwdledggnhmni
kfagk
- Chain 'F':
Sequence; same for both SEQRES and ATOM records: (download)
>1ymhF (F:)
keevtikvnlifadgkiqtaefkgtfeeataeayryadllakvngeytwdledggnhmni
kfagk