PDB entry 1ykh
View 1ykh on RCSB PDB site
Description: Structure of the mediator MED7/MED21 (Med7/Srb7) subcomplex
Class: gene regulation
Keywords: gene regulation
Deposited on
2005-01-18, released
2005-02-22
The last revision prior to the SCOPe 2.05 freeze date was dated
2009-02-24, with a file datestamp of
2009-02-03.
Experiment type: XRAY
Resolution: 3 Å
R-factor: 0.257
AEROSPACI score: 0.19
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: RNA polymerase II mediator complex protein MED7
Species: Saccharomyces cerevisiae [TaxId:4932]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d1ykha_ - Chain 'B':
Compound: RNA polymerase II holoenzyme component SRB7
Species: Saccharomyces cerevisiae [TaxId:4932]
Database cross-references and differences (RAF-indexed):
- Uniprot P47822
- engineered (4)
- engineered (118)
- engineered (124)
Domains in SCOPe 2.05: d1ykhb1
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1ykhA (A:)
masmkkstenestnyqykiqelrkllkslllnyleligvlsinpdmyerkvenirtilvn
ihhllneyrphqsreslimlleeqleykrgeireieqvckqvhdklts
Sequence, based on observed residues (ATOM records): (download)
>1ykhA (A:)
nyqykiqelrkllkslllnyleligvlsinpdmyerkvenirtilvnihhllneyrphqs
reslimlleeqleykrgeireieqvckqvhdklts
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1ykhB (B:)
mtdrmtqlqicldqmteqfcatlnyidknhgferltvnepqmsdkhatvvppeefsntid
elstdiilktrqinklidslpgvdvsaeeqlrkidmlqkklvevedekieaikkkeklmr
hvdsmiedfvdg
Sequence, based on observed residues (ATOM records): (download)
>1ykhB (B:)
tdrmtqlqicldqmteqfcatlnyidknhgfevvppeefsntidelstdiilktrqinkl
idslpgvdvsaeeqlrkidmlqkklvevedekieaikkkeklmrhvdsmiedfv