PDB entry 1ygc

View 1ygc on RCSB PDB site
Description: Short Factor VIIa with a small molecule inhibitor
Class: hydrolase
Keywords: inverted oxy-anion hole, HYDROLASE
Deposited on 2005-01-04, released 2005-01-18
The last revision prior to the SCOPe 2.01 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.189
AEROSPACI score: 0.46 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'H':
    Compound: Coagulation factor VII
    Species: Homo sapiens [TaxId:9606]
    Gene: F7
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d1ygch_
  • Chain 'L':
    Compound: Coagulation factor VII
    Species: Homo sapiens [TaxId:9606]
    Gene: F7
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d1ygcl_
  • Heterogens: CA, SO4, 905, HOH

PDB Chain Sequences:

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1ygcH (H:)
    ivggkvcpkgecpwqvlllvngaqlcggtlintiwvvsaahcfdkiknwrnliavlgehd
    lsehdgdeqsrrvaqviipstyvpgttnhdiallrlhqpvvltdhvvplclpertfsert
    lafvrfslvsgwgqlldrgatalelmvlnvprlmtqdclqqsrkvgdspniteymfcagy
    sdgskdsckgdsggphathyrgtwyltgivswgqgcatvghfgvytrvsqyiewlqklmr
    seprpgvllrapfp
    

  • Chain 'L':
    Sequence, based on SEQRES records: (download)
    >1ygcL (L:)
    icvnenggceqycsdhtgtkrscrchegyslladgvsctptveypcgkipilekrnaskp
    qgr
    

    Sequence, based on observed residues (ATOM records): (download)
    >1ygcL (L:)
    icvnenggceqycsdhtgtkrscrchegyslladgvsctptveypcgkipile