PDB entry 1yfn
View 1yfn on RCSB PDB site
Description: Versatile modes of peptide recognition by the AAA+ adaptor protein SspB- the crystal structure of a SspB-RseA complex
Class: protein binding
Keywords: protein-peptide complex, sspB, rseA, PROTEIN BINDING
Deposited on
2005-01-03, released
2005-05-17
The last revision prior to the SCOPe 2.08 freeze date was dated
2009-02-24, with a file datestamp of
2009-02-03.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: 0.234
AEROSPACI score: 0.45
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Stringent starvation protein B
Species: Escherichia coli [TaxId:562]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1yfna_ - Chain 'B':
Compound: Stringent starvation protein B
Species: Escherichia coli [TaxId:562]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1yfnb_ - Chain 'C':
Compound: Stringent starvation protein B
Species: Escherichia coli [TaxId:562]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1yfnc_ - Chain 'D':
Compound: Stringent starvation protein B
Species: Escherichia coli [TaxId:562]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1yfnd_ - Chain 'E':
Compound: Sigma-E factor negative regulatory protein
Species: synthetic, synthetic
Database cross-references and differences (RAF-indexed):
- Chain 'F':
Compound: Sigma-E factor negative regulatory protein
Species: synthetic, synthetic
Database cross-references and differences (RAF-indexed):
- Chain 'G':
Compound: Sigma-E factor negative regulatory protein
Species: synthetic, synthetic
Database cross-references and differences (RAF-indexed):
- Chain 'H':
Compound: Sigma-E factor negative regulatory protein
Species: synthetic, synthetic
Database cross-references and differences (RAF-indexed):
- Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1yfnA (A:)
mdlsqltprrpyllrafyewlldnqltphlvvdvtlpgvqvpmeyardgqivlniaprav
gnlelandevrfnarfggiprqvsvplaavlaiyarengagtmfepeaaydedtsimn
Sequence, based on observed residues (ATOM records): (download)
>1yfnA (A:)
lsqltprrpyllrafyewlldnqltphlvvdvtlpgvqvpmeyardgqivlniapravgn
lelandevrfnarfggiprqvsvplaavlaiyarengagtmfepeaayd
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1yfnB (B:)
mdlsqltprrpyllrafyewlldnqltphlvvdvtlpgvqvpmeyardgqivlniaprav
gnlelandevrfnarfggiprqvsvplaavlaiyarengagtmfepeaaydedtsimn
Sequence, based on observed residues (ATOM records): (download)
>1yfnB (B:)
qltprrpyllrafyewlldnqltphlvvdvtlpgvqvpmeyardgqivlniapravgnle
landevrfnarfggiprqvsvplaavlaiyarengagtmfepeaayd
- Chain 'C':
Sequence, based on SEQRES records: (download)
>1yfnC (C:)
mdlsqltprrpyllrafyewlldnqltphlvvdvtlpgvqvpmeyardgqivlniaprav
gnlelandevrfnarfggiprqvsvplaavlaiyarengagtmfepeaaydedtsimn
Sequence, based on observed residues (ATOM records): (download)
>1yfnC (C:)
qltprrpyllrafyewlldnqltphlvvdvtlpgvqvpmeyardgqivlniapravgnle
landevrfnarfggiprqvsvplaavlaiyarengagtmfepeaayd
- Chain 'D':
Sequence, based on SEQRES records: (download)
>1yfnD (D:)
mdlsqltprrpyllrafyewlldnqltphlvvdvtlpgvqvpmeyardgqivlniaprav
gnlelandevrfnarfggiprqvsvplaavlaiyarengagtmfepeaaydedtsimn
Sequence, based on observed residues (ATOM records): (download)
>1yfnD (D:)
qltprrpyllrafyewlldnqltphlvvdvtlpgvqvpmeyardgqivlniapravgnle
landevrfnarfggiprqvsvplaavlaiyarengagtmfepeaayd
- Chain 'E':
No sequence available.
- Chain 'F':
No sequence available.
- Chain 'G':
No sequence available.
- Chain 'H':
No sequence available.