PDB entry 1yfm

View 1yfm on RCSB PDB site
Description: recombinant yeast fumarase
Class: lyase
Keywords: lyase, fumarase, krebs cycle, active site water, hydratase, multi-subunit active site
Deposited on 1998-01-07, released 1998-07-08
The last revision prior to the SCOP 1.73 freeze date was dated 1998-07-08, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: 0.196
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Fumarase
    Species: SACCHAROMYCES CEREVISIAE
    Gene: FUM1
    Database cross-references and differences (RAF-indexed):
    • Uniprot P08417
      • engineered (288)
    Domains in SCOP 1.73: d1yfma_

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1yfmA (A:)
mlrftncscktfvkssyklnirrmnssfrtetdafgeihvpadkywgaqtqrsfqnfkig
garermplplvhafgvlkksaaivneslggldpkiskaiqqaadevasgklddhfplvvf
qtgsgtqsnmnanevisnraieilggkigskqvhpnnhcnqsqssndtfptvmhiaaslq
iqnelipeltnlknaleakskefdhivkigrthlqdatpltlgqefsgyvqqvengiqrv
ahslktlsflaqggtavgtglntkpgfdvkiaeqisketglkfqtapnrfealaahdaiv
ecsgalntlacslfkiaqdirylgsgprcgyhelmlpenepgssimpgkvnptqnealtq
vcvqvmgnnaaitfagsqgqfelnvfkpvmianllnsirlitdaaysfrvhcvegikane
prihelltkslmlvtalnpkigydaaskvaknahkkgitlkesalelgvltekefdewvv
pehmlgpk

    Sequence, based on observed residues (ATOM records): (download) 
    >1yfmA (A:)
sfrtetdafgeihvpadkywgaqtqrsfqnfkiggarermplplvhafgvlkksaaivne
slggldpkiskaiqqaadevasgklddhfplvvfqtgsgtqsnmnanevisnraieivhp
nnhcnqsqssndtfptvmhiaaslqiqnelipeltnlknaleakskefdhivkigrthlq
datpltlgqefsgyvqqvengiqrvahslktlsflaqggtavgtglntkpgfdvkiaeqi
sketglkfqtapnrfealaahdaivecsgalntlacslfkiaqdirylgsgprcgyhelm
lpenepgssimpgkvnptqnealtqvcvqvmgnnaaitfagsqgqfelnvfkpvmianll
nsirlitdaaysfrvhcvegikaneprihelltkslmlvtalnpkigydaaskvaknahk
kgitlkesalelgvltekefdewvvpehml