PDB entry 1yf0
View 1yf0 on RCSB PDB site
Description: Structural and biochemical analysis of the link between enzymatic activity and oligomerization in AhpC, a bacterial peroxiredoxin.
Class: oxidoreductase
Keywords: peroxiredoxin, AhpC, Alkyl hydroperoxide reductase subunit C, OXIDOREDUCTASE
Deposited on
2004-12-29, released
2005-08-16
The last revision prior to the SCOPe 2.08 freeze date was dated
2012-05-09, with a file datestamp of
2012-05-04.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.174
AEROSPACI score: 0.35
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Alkyl hydroperoxide reductase subunit C
Species: Salmonella typhimurium [TaxId:602]
Gene: AhpC
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1yf0a1 - Chain 'B':
Compound: Alkyl hydroperoxide reductase subunit C
Species: Salmonella typhimurium [TaxId:602]
Gene: AhpC
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1yf0b_ - Chain 'C':
Compound: Alkyl hydroperoxide reductase subunit C
Species: Salmonella typhimurium [TaxId:602]
Gene: AhpC
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1yf0c_ - Chain 'D':
Compound: Alkyl hydroperoxide reductase subunit C
Species: Salmonella typhimurium [TaxId:602]
Gene: AhpC
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1yf0d_ - Chain 'E':
Compound: Alkyl hydroperoxide reductase subunit C
Species: Salmonella typhimurium [TaxId:602]
Gene: AhpC
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1yf0e_ - Heterogens: SO4, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1yf0A (A:)
slintkikpfknqafkngefievtekdtegrwsvfffypadftfvcptelgdvadhyeel
qklgvdvysvstdthfihkawhsssetiakikyamigdptgaltrnfdnmredegladra
tfvvdpqgiiqaievtaegigrdasdllrkikaaqyvaahpgevcpakwkegeatlapsl
dlvgki
Sequence, based on observed residues (ATOM records): (download)
>1yf0A (A:)
slintkikpfknqafkngefievtekdtegrwsvfffypadftfvcptelgdvadhyeel
qklgvdvysvstdthfihkawhsssetiakikyamigdptgaltrnfdnmredegladra
tfvvdpqgiiqaievtaegigrdasdllrkikaaqyvaahpgevcpa
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1yf0B (B:)
slintkikpfknqafkngefievtekdtegrwsvfffypadftfvcptelgdvadhyeel
qklgvdvysvstdthfihkawhsssetiakikyamigdptgaltrnfdnmredegladra
tfvvdpqgiiqaievtaegigrdasdllrkikaaqyvaahpgevcpakwkegeatlapsl
dlvgki
Sequence, based on observed residues (ATOM records): (download)
>1yf0B (B:)
slintkikpfknqafkngefievtekdtegrwsvfffypadftfvcptelgdvadhyeel
qklgvdvysvstdthfihkawhsssetiakikyamigdptgaltrnfdnmredegladra
tfvvdpqgiiqaievtaegigrdasdllrkikaaqyvaahpgevc
- Chain 'C':
Sequence, based on SEQRES records: (download)
>1yf0C (C:)
slintkikpfknqafkngefievtekdtegrwsvfffypadftfvcptelgdvadhyeel
qklgvdvysvstdthfihkawhsssetiakikyamigdptgaltrnfdnmredegladra
tfvvdpqgiiqaievtaegigrdasdllrkikaaqyvaahpgevcpakwkegeatlapsl
dlvgki
Sequence, based on observed residues (ATOM records): (download)
>1yf0C (C:)
slintkikpfknqafkngefievtekdtegrwsvfffypadftfvcptelgdvadhyeel
qklgvdvysvstdthfihkawhsssetiakikyamigdptgaltrnfdnmredegladra
tfvvdpqgiiqaievtaegigrdasdllrkikaaqyvaahpge
- Chain 'D':
Sequence, based on SEQRES records: (download)
>1yf0D (D:)
slintkikpfknqafkngefievtekdtegrwsvfffypadftfvcptelgdvadhyeel
qklgvdvysvstdthfihkawhsssetiakikyamigdptgaltrnfdnmredegladra
tfvvdpqgiiqaievtaegigrdasdllrkikaaqyvaahpgevcpakwkegeatlapsl
dlvgki
Sequence, based on observed residues (ATOM records): (download)
>1yf0D (D:)
slintkikpfknqafkngefievtekdtegrwsvfffypadftfvcptelgdvadhyeel
qklgvdvysvstdthfihkawhsssetiakikyamigdptgaltrnfdnmredegladra
tfvvdpqgiiqaievtaegigrdasdllrkikaaqyvaahpgevcp
- Chain 'E':
Sequence, based on SEQRES records: (download)
>1yf0E (E:)
slintkikpfknqafkngefievtekdtegrwsvfffypadftfvcptelgdvadhyeel
qklgvdvysvstdthfihkawhsssetiakikyamigdptgaltrnfdnmredegladra
tfvvdpqgiiqaievtaegigrdasdllrkikaaqyvaahpgevcpakwkegeatlapsl
dlvgki
Sequence, based on observed residues (ATOM records): (download)
>1yf0E (E:)
slintkikpfknqafkngefievtekdtegrwsvfffypadftfvcptelgdvadhyeel
qklgvdvysvstdthfihkawhsssetiakikyamigdptgaltrnfdnmredegladra
tfvvdpqgiiqaievtaegigrdasdllrkikaaqyvaahpgevc