PDB entry 1yey

View 1yey on RCSB PDB site
Description: Crystal Structure of L-fuconate Dehydratase from Xanthomonas campestris pv. campestris str. ATCC 33913
Class: structural genomics, unknown function
Keywords: Structural Genomics, L-fuconate dehydratase, enolase superfamily, NYSGXRC target T2188, PSI, Protein Structure Initiative, New York Structural GenomiX Research Consortium
Deposited on 2004-12-28, released 2005-01-11
The last revision prior to the SCOP 1.73 freeze date was dated 2006-11-14, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2.34 Å
R-factor: 0.247
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: L-fuconate dehydratase
    Species: Xanthomonas campestris pv. campestris
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8P3K2 (3-End)
      • modified residue (3)
      • modified residue (28)
      • modified residue (111)
      • modified residue (113)
      • modified residue (247)
      • modified residue (264)
      • modified residue (368)
      • modified residue (378)
      • modified residue (416)
    Domains in SCOP 1.73: d1yeya1, d1yeya2
  • Chain 'B':
    Compound: L-fuconate dehydratase
    Species: Xanthomonas campestris pv. campestris
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8P3K2 (3-End)
      • modified residue (3)
      • modified residue (28)
      • modified residue (111)
      • modified residue (113)
      • modified residue (247)
      • modified residue (264)
      • modified residue (368)
      • modified residue (378)
      • modified residue (416)
    Domains in SCOP 1.73: d1yeyb1, d1yeyb2
  • Chain 'C':
    Compound: L-fuconate dehydratase
    Species: Xanthomonas campestris pv. campestris
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8P3K2 (3-End)
      • modified residue (3)
      • modified residue (28)
      • modified residue (111)
      • modified residue (113)
      • modified residue (247)
      • modified residue (264)
      • modified residue (368)
      • modified residue (378)
      • modified residue (416)
    Domains in SCOP 1.73: d1yeyc1, d1yeyc2
  • Chain 'D':
    Compound: L-fuconate dehydratase
    Species: Xanthomonas campestris pv. campestris
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8P3K2 (3-End)
      • modified residue (3)
      • modified residue (28)
      • modified residue (111)
      • modified residue (113)
      • modified residue (247)
      • modified residue (264)
      • modified residue (368)
      • modified residue (378)
      • modified residue (416)
    Domains in SCOP 1.73: d1yeyd1, d1yeyd2
  • Heterogens: MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1yeyA (A:)
gshmrtiialethdvrfptsreldgsdamnpdpdysaayvvlrtdgaedlagyglvftig
rgndvqtaavaalaehvvglsvdkviadlgafarrltndsqlrwlgpekgvmhmaigavi
naawdlaaraankplwrfiaeltpeqlvdtidfrylsdaltrdealailrdaqpqraart
atlieqgypayttspgwlgysdeklvrlakeavadgfrtiklkvganvqddirrcrlara
aigpdiamavdanqrwdvgpaidwmrqlaefdiawieeptspddvlghaairqgitpvpv
stgehtqnrvvfkqllqagavdliqidaarvggvnenlailllaakfgvrvfphaggvgl
celvqhlamadfvaitgkmedraiefvdhlhqhfldpvriqhgrylapevpgfsaemhpa
siaefsypdgrfwvedlaaskaka

    Sequence, based on observed residues (ATOM records): (download) 
    >1yeyA (A:)
mrtiialethdvrfptsremnpdpdysaayvvlrtdgaedlagyglvftigrgndvqtaa
vaalaehvvglsvdkviadlgafarrltndsqlrwlgpekgvmhmaigavinaawdlaar
aankplwrfiaeltpeqlvdtidfrylsdaltrdealailrdaqpqraartatlieqgyp
ayttspgwdeklvrlakeavadgfrtiklkvganvqddirrcrlaraaigpdiamavdan
qrwdvgpaidwmrqlaefdiawieeptspddvlghaairqgitpvpvstgehtqnrvvfk
qllqagavdliqidaarvggvnenlailllaakfgvrvfphaggvglcelvqhlamadfv
aitgkmedraiefvdhlhqhfldpvriqhgrylapevpgfsaemhpasiaefsypdgrfw
vedla

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1yeyB (B:)
gshmrtiialethdvrfptsreldgsdamnpdpdysaayvvlrtdgaedlagyglvftig
rgndvqtaavaalaehvvglsvdkviadlgafarrltndsqlrwlgpekgvmhmaigavi
naawdlaaraankplwrfiaeltpeqlvdtidfrylsdaltrdealailrdaqpqraart
atlieqgypayttspgwlgysdeklvrlakeavadgfrtiklkvganvqddirrcrlara
aigpdiamavdanqrwdvgpaidwmrqlaefdiawieeptspddvlghaairqgitpvpv
stgehtqnrvvfkqllqagavdliqidaarvggvnenlailllaakfgvrvfphaggvgl
celvqhlamadfvaitgkmedraiefvdhlhqhfldpvriqhgrylapevpgfsaemhpa
siaefsypdgrfwvedlaaskaka

    Sequence, based on observed residues (ATOM records): (download) 
    >1yeyB (B:)
mrtiialethdvrfptsreldgsdamnpdpdysaayvvlrtdgaedlagyglvftigrgn
dvqtaavaalaehvvglsvdkviadlgafarrltndsqlrwlgpekgvmhmaigavinaa
wdlaaraankplwrfiaeltpeqlvdtidfrylsdaltrdealailrdaqpqraartatl
ieqgypayttspgwlgysdeklvrlakeavadgfrtiklkvganvqddirrcrlaraaig
pdiamavdanqrwdvgpaidwmrqlaefdiawieeptspddvlghaairqgitpvpvstg
ehtqnrvvfkqllqagavdliqidaarvggvnenlailllaakfgvrvfphaggvglcel
vqhlamadfvaitgkmedraiefvdhlhqhfldpvriqhgrylapevpgfsaemhpasia
efsypdgrfwve

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1yeyC (C:)
gshmrtiialethdvrfptsreldgsdamnpdpdysaayvvlrtdgaedlagyglvftig
rgndvqtaavaalaehvvglsvdkviadlgafarrltndsqlrwlgpekgvmhmaigavi
naawdlaaraankplwrfiaeltpeqlvdtidfrylsdaltrdealailrdaqpqraart
atlieqgypayttspgwlgysdeklvrlakeavadgfrtiklkvganvqddirrcrlara
aigpdiamavdanqrwdvgpaidwmrqlaefdiawieeptspddvlghaairqgitpvpv
stgehtqnrvvfkqllqagavdliqidaarvggvnenlailllaakfgvrvfphaggvgl
celvqhlamadfvaitgkmedraiefvdhlhqhfldpvriqhgrylapevpgfsaemhpa
siaefsypdgrfwvedlaaskaka

    Sequence, based on observed residues (ATOM records): (download) 
    >1yeyC (C:)
mrtiialethdvrfptsreldgsdamnpdpdysaayvvlrtdgaedlagyglvftigrgn
dvqtaavaalaehvvglsvdkviadlgafarrltndsqlrwlgpekgvmhmaigavinaa
wdlaaraankplwrfiaeltpeqlvdtidfrylsdaltrdealailrdaqpqraartatl
ieqgypayttspgwlgysdeklvrlakeavadgfrtiklkvganvqddirrcrlaraaig
pdiamavdanqrwdvgpaidwmrqlaefdiawieeptspddvlghaairqgitpvpvstg
ehtqnrvvfkqllqagavdliqidaarvggvnenlailllaakfgvrvfphaggvglcel
vqhlamadfvaitgkmedraiefvdhlhqhfldpvriqhgrylapevpgfsaemhpasia
efsypdgrfwvedla

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1yeyD (D:)
gshmrtiialethdvrfptsreldgsdamnpdpdysaayvvlrtdgaedlagyglvftig
rgndvqtaavaalaehvvglsvdkviadlgafarrltndsqlrwlgpekgvmhmaigavi
naawdlaaraankplwrfiaeltpeqlvdtidfrylsdaltrdealailrdaqpqraart
atlieqgypayttspgwlgysdeklvrlakeavadgfrtiklkvganvqddirrcrlara
aigpdiamavdanqrwdvgpaidwmrqlaefdiawieeptspddvlghaairqgitpvpv
stgehtqnrvvfkqllqagavdliqidaarvggvnenlailllaakfgvrvfphaggvgl
celvqhlamadfvaitgkmedraiefvdhlhqhfldpvriqhgrylapevpgfsaemhpa
siaefsypdgrfwvedlaaskaka

    Sequence, based on observed residues (ATOM records): (download) 
    >1yeyD (D:)
mrtiialethdvrfptsresdamnpdpdysaayvvlrtdgaedlagyglvftigrgndvq
taavaalaehvvglsvdkviadlgafarrltndsqlrwlgpekgvmhmaigavinaawdl
aaraankplwrfiaeltpeqlvdtidfrylsdaltrdealailrdaqpqraartatlieq
gypayttspgwlgysdeklvrlakeavadgfrtiklkvganvqddirrcrlaraaigpdi
amavdanqrwdvgpaidwmrqlaefdiawieeptspddvlghaairqgitpvpvstgeht
qnrvvfkqllqagavdliqidaarvggvnenlailllaakfgvrvfphaggvglcelvqh
lamadfvaitgkmedraiefvdhlhqhfldpvriqhgrylapevpgfsaemhpasiaefs
ypdgrfwvedlaa