PDB entry 1yex
View 1yex on RCSB PDB site
Description: Structural and biochemical analysis of the link between enzymatic activity and oligomerization in AhpC, a bacterial peroxiredoxin.
Class: oxidoreductase
Keywords: AHPC, Peroxiredoxin, peroxidase, OXIDOREDUCTASE
Deposited on
2004-12-28, released
2005-08-16
The last revision prior to the SCOPe 2.08 freeze date was dated
2012-05-09, with a file datestamp of
2012-05-04.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.19
AEROSPACI score: 0.37
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Alkyl hydroperoxide reductase subunit C
Species: Salmonella typhimurium [TaxId:602]
Gene: AhpC
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1yexa1 - Chain 'B':
Compound: Alkyl hydroperoxide reductase subunit C
Species: Salmonella typhimurium [TaxId:602]
Gene: AhpC
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1yexb_ - Chain 'C':
Compound: Alkyl hydroperoxide reductase subunit C
Species: Salmonella typhimurium [TaxId:602]
Gene: AhpC
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1yexc_ - Chain 'D':
Compound: Alkyl hydroperoxide reductase subunit C
Species: Salmonella typhimurium [TaxId:602]
Gene: AhpC
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1yexd_ - Chain 'E':
Compound: Alkyl hydroperoxide reductase subunit C
Species: Salmonella typhimurium [TaxId:602]
Gene: AhpC
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1yexe_ - Heterogens: SO4, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1yexA (A:)
slintkikpfknqafkngefievtekdtegrwsvfffypadftfvcptelgdvadhyeel
qklgvdvysvstdthfdhkawhsssetiakikyamigdptgaltrnfdnmredegladra
tfvvdpqgiiqaievtaegigrdasdllrkikaaqyvaahpgevcpakwkegeatlapsl
dlvgki
Sequence, based on observed residues (ATOM records): (download)
>1yexA (A:)
slintkikpfknqafkngefievtekdtegrwsvfffypadftfvcptelgdvadhyeel
qklgvdvysvstdthfdhkawhsssetiakikyamigdptgaltrnfdnmredegladra
tfvvdpqgiiqaievtaegigrdasdllrkikaaqyvaahpgevcpa
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1yexB (B:)
slintkikpfknqafkngefievtekdtegrwsvfffypadftfvcptelgdvadhyeel
qklgvdvysvstdthfdhkawhsssetiakikyamigdptgaltrnfdnmredegladra
tfvvdpqgiiqaievtaegigrdasdllrkikaaqyvaahpgevcpakwkegeatlapsl
dlvgki
Sequence, based on observed residues (ATOM records): (download)
>1yexB (B:)
slintkikpfknqafkngefievtekdtegrwsvfffypadftfvcptelgdvadhyeel
qklgvdvysvstdthfdhkawhsssetiakikyamigdptgaltrnfdnmredegladra
tfvvdpqgiiqaievtaegigrdasdllrkikaaqyvaahpgevc
- Chain 'C':
Sequence, based on SEQRES records: (download)
>1yexC (C:)
slintkikpfknqafkngefievtekdtegrwsvfffypadftfvcptelgdvadhyeel
qklgvdvysvstdthfdhkawhsssetiakikyamigdptgaltrnfdnmredegladra
tfvvdpqgiiqaievtaegigrdasdllrkikaaqyvaahpgevcpakwkegeatlapsl
dlvgki
Sequence, based on observed residues (ATOM records): (download)
>1yexC (C:)
slintkikpfknqafkngefievtekdtegrwsvfffypadftfvcptelgdvadhyeel
qklgvdvysvstdthfdhkawhsssetiakikyamigdptgaltrnfdnmredegladra
tfvvdpqgiiqaievtaegigrdasdllrkikaaqyvaahpge
- Chain 'D':
Sequence, based on SEQRES records: (download)
>1yexD (D:)
slintkikpfknqafkngefievtekdtegrwsvfffypadftfvcptelgdvadhyeel
qklgvdvysvstdthfdhkawhsssetiakikyamigdptgaltrnfdnmredegladra
tfvvdpqgiiqaievtaegigrdasdllrkikaaqyvaahpgevcpakwkegeatlapsl
dlvgki
Sequence, based on observed residues (ATOM records): (download)
>1yexD (D:)
slintkikpfknqafkngefievtekdtegrwsvfffypadftfvcptelgdvadhyeel
qklgvdvysvstdthfdhkawhsssetiakikyamigdptgaltrnfdnmredegladra
tfvvdpqgiiqaievtaegigrdasdllrkikaaqyvaahpgevcp
- Chain 'E':
Sequence, based on SEQRES records: (download)
>1yexE (E:)
slintkikpfknqafkngefievtekdtegrwsvfffypadftfvcptelgdvadhyeel
qklgvdvysvstdthfdhkawhsssetiakikyamigdptgaltrnfdnmredegladra
tfvvdpqgiiqaievtaegigrdasdllrkikaaqyvaahpgevcpakwkegeatlapsl
dlvgki
Sequence, based on observed residues (ATOM records): (download)
>1yexE (E:)
slintkikpfknqafkngefievtekdtegrwsvfffypadftfvcptelgdvadhyeel
qklgvdvysvstdthfdhkawhsssetiakikyamigdptgaltrnfdnmredegladra
tfvvdpqgiiqaievtaegigrdasdllrkikaaqyvaahpgevc