PDB entry 1yc5
View 1yc5 on RCSB PDB site
Description: Sir2-p53 peptide-nicotinamide
Class: hydrolase
Keywords: sir2, sirtuin, sir2Tm, SirT1, p53, nicotinamide, HYDROLASE
Deposited on
2004-12-21, released
2005-04-26
The last revision prior to the SCOPe 2.08 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 1.4 Å
R-factor: 0.186
AEROSPACI score: 0.68
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: NAD-dependent deacetylase
Species: Thermotoga maritima [TaxId:2336]
Gene: npdA
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1yc5a1 - Chain 'B':
Compound: Cellular tumor antigen p53 peptide
Species: synthetic, synthetic
Database cross-references and differences (RAF-indexed):
- Heterogens: ZN, NCA, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1yc5A (A:)
mkmkefldllnesrltvtltgagistpsgipdfrgpngiykkysqnvfdidffyshpeef
yrfakegifpmlqakpnlahvllakleekglieavitqnidrlhqragskkvielhgnve
eyycvrcekkytvedvikklessdvplcddcnslirpnivffgenlpqdalreaiglssr
aslmivlgsslvvypaaelplitvrsggklvivnlgetpfddiatlkynmdvvefarrvm
eeggis
Sequence, based on observed residues (ATOM records): (download)
>1yc5A (A:)
mkmkefldllnesrltvtltgagistpsgipdfqnvfdidffyshpeefyrfakegifpm
lqakpnlahvllakleekglieavitqnidrlhqragskkvielhgnveeyycvrcekky
tvedvikklessdvplcddcnslirpnivffgenlpqdalreaiglssraslmivlgssl
vvypaaelplitvrsggklvivnlgetpfddiatlkynmdvvefarrvmeeggi
- Chain 'B':
No sequence available.