PDB entry 1ybu
View 1ybu on RCSB PDB site
Description: Mycobacterium tuberculosis adenylyl cyclase Rv1900c CHD, in complex with a substrate analog.
Class: hydrolase
Keywords: Cyclase homology domain, CHD, Rv1900c, HYDROLASE
Deposited on
2004-12-21, released
2005-02-15
The last revision prior to the SCOPe 2.06 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-08.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.233
AEROSPACI score: 0.28
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: lipJ
Species: Mycobacterium tuberculosis [TaxId:83332]
Gene: Rv1900c
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d1ybua_ - Chain 'B':
Compound: lipJ
Species: Mycobacterium tuberculosis [TaxId:83332]
Gene: Rv1900c
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d1ybub_ - Chain 'C':
Compound: lipJ
Species: Mycobacterium tuberculosis [TaxId:83332]
Gene: Rv1900c
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d1ybuc_ - Chain 'D':
Compound: lipJ
Species: Mycobacterium tuberculosis [TaxId:83332]
Gene: Rv1900c
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d1ybud_ - Heterogens: MN, APC, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1ybuA (A:)
mrgshhhhhhgsaermlatimftdivgstqhaaalgddrwrdlldnhdtivcheiqrfgg
revntagdgfvatftspsaaiacaddivdavaalgievrigihagevevrdashgtdvag
vavhigarvcalagpsevlvsstvrdivagsrhrfaergeqelkgvpgrwrlcvlmrdda
trtr
Sequence, based on observed residues (ATOM records): (download)
>1ybuA (A:)
aermlatimftdivgstqhaaalgddrwrdlldnhdtivcheiqrfggrevntagdgfva
tftspsaaiacaddivdavaalgievrigihagevevrdashgtdvagvavhigarvcal
agpsevlvsstvrdivagsrhrfaergeqelkgvpgrwrlcvlmrd
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1ybuB (B:)
mrgshhhhhhgsaermlatimftdivgstqhaaalgddrwrdlldnhdtivcheiqrfgg
revntagdgfvatftspsaaiacaddivdavaalgievrigihagevevrdashgtdvag
vavhigarvcalagpsevlvsstvrdivagsrhrfaergeqelkgvpgrwrlcvlmrdda
trtr
Sequence, based on observed residues (ATOM records): (download)
>1ybuB (B:)
aermlatimftdivgstqhaaalgddrwrdlldnhdtivcheiqrfggrevntagdgfva
tftspsaaiacaddivdavaalgievrigihagevevrdatdvagvavhigarvcalagp
sevlvsstvrdivagsrhrfaergeqelkgvpgrwrlcvlmrd
- Chain 'C':
Sequence, based on SEQRES records: (download)
>1ybuC (C:)
mrgshhhhhhgsaermlatimftdivgstqhaaalgddrwrdlldnhdtivcheiqrfgg
revntagdgfvatftspsaaiacaddivdavaalgievrigihagevevrdashgtdvag
vavhigarvcalagpsevlvsstvrdivagsrhrfaergeqelkgvpgrwrlcvlmrdda
trtr
Sequence, based on observed residues (ATOM records): (download)
>1ybuC (C:)
aermlatimftdivgstqhaaalgddrwrdlldnhdtivcheiqrfggrevntagdgfva
tftspsaaiacaddivdavaalgievrigihagevevrdatdvagvavhigarvcalagp
sevlvsstvrdivagsrhrfaergeqelkgvpgrwrlcvlmrd
- Chain 'D':
Sequence, based on SEQRES records: (download)
>1ybuD (D:)
mrgshhhhhhgsaermlatimftdivgstqhaaalgddrwrdlldnhdtivcheiqrfgg
revntagdgfvatftspsaaiacaddivdavaalgievrigihagevevrdashgtdvag
vavhigarvcalagpsevlvsstvrdivagsrhrfaergeqelkgvpgrwrlcvlmrdda
trtr
Sequence, based on observed residues (ATOM records): (download)
>1ybuD (D:)
aermlatimftdivgstqhaaalgddrwrdlldnhdtivcheiqrfggrevntagdgfva
tftspsaaiacaddivdavaalgievrigihagevevrdashgtdvagvavhigarvcal
agpsevlvsstvrdivagsrhrfaergeqelkgvpgrwrlcvlmrd