PDB entry 1yb0
View 1yb0 on RCSB PDB site
Description: Structure of PlyL
Class: hydrolase
Keywords: N-acetylmuramoyl-L-alanine amidase,
PlyL,
E.C.3.5.1.28
Deposited on
2004-12-18, released
2005-08-23
The last revision prior to the SCOP 1.75 freeze date was dated
2006-03-14, with a file datestamp of
2007-06-04.
Experiment type: XRAY
Resolution: 1.86 Å
R-factor: 0.206
AEROSPACI score: 0.57
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: prophage lambdaba02, n-acetylmuramoyl-l-alanine amidase, family 2
Species: Bacillus anthracis
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.75: d1yb0a1 - Chain 'B':
Compound: prophage lambdaba02, n-acetylmuramoyl-l-alanine amidase, family 2
Species: Bacillus anthracis
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.75: d1yb0b1 - Chain 'C':
Compound: prophage lambdaba02, n-acetylmuramoyl-l-alanine amidase, family 2
Species: Bacillus anthracis
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.75: d1yb0c1 - Heterogens: ZN, PO4, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1yb0A (A:)
meirkklvvpskygtkcpytmkpkyitvhntyndapaenevnymitnnnevsfhvavddk
qaiqgipwernawacgdgngpgnresisveicysksggdryykaennavdvvrqlmsmyn
ipienvrthqswsgkycphrmlaegrwgafiqkvksgnv
Sequence, based on observed residues (ATOM records): (download)
>1yb0A (A:)
meirkklvvpskygtkcpytmkpkyitvhntyndapaenevnymitnnnevsfhvavddk
qaiqgipwernawacgdgngpgnresisveicysksggdryykaennavdvvrqlmsmyn
ipienvrthqswsgkycphrmlaegrwgafiqkvksg
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>1yb0B (B:)
meirkklvvpskygtkcpytmkpkyitvhntyndapaenevnymitnnnevsfhvavddk
qaiqgipwernawacgdgngpgnresisveicysksggdryykaennavdvvrqlmsmyn
ipienvrthqswsgkycphrmlaegrwgafiqkvksgnv
- Chain 'C':
Sequence, based on SEQRES records: (download)
>1yb0C (C:)
meirkklvvpskygtkcpytmkpkyitvhntyndapaenevnymitnnnevsfhvavddk
qaiqgipwernawacgdgngpgnresisveicysksggdryykaennavdvvrqlmsmyn
ipienvrthqswsgkycphrmlaegrwgafiqkvksgnv
Sequence, based on observed residues (ATOM records): (download)
>1yb0C (C:)
meirkklvvpskygtkcpytmkpkyitvhntyndapaenevnymitnnnevsfhvavddk
qaiqgipwernawacgdgngpgnresisveicysksggdryykaennavdvvrqlmsmyn
ipienvrthqswsgkycphrmlaegrwgafiqkvksg