PDB entry 1yb0

View 1yb0 on RCSB PDB site
Description: Structure of PlyL
Class: hydrolase
Keywords: N-acetylmuramoyl-L-alanine amidase, PlyL, E.C.3.5.1.28, HYDROLASE
Deposited on 2004-12-18, released 2005-08-23
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 1.86 Å
R-factor: 0.206
AEROSPACI score: 0.47 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: prophage lambdaba02, n-acetylmuramoyl-l-alanine amidase, family 2
    Species: Bacillus anthracis [TaxId:1392]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1yb0a1
  • Chain 'B':
    Compound: prophage lambdaba02, n-acetylmuramoyl-l-alanine amidase, family 2
    Species: Bacillus anthracis [TaxId:1392]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1yb0b_
  • Chain 'C':
    Compound: prophage lambdaba02, n-acetylmuramoyl-l-alanine amidase, family 2
    Species: Bacillus anthracis [TaxId:1392]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1yb0c_
  • Heterogens: ZN, PO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1yb0A (A:)
meirkklvvpskygtkcpytmkpkyitvhntyndapaenevnymitnnnevsfhvavddk
qaiqgipwernawacgdgngpgnresisveicysksggdryykaennavdvvrqlmsmyn
ipienvrthqswsgkycphrmlaegrwgafiqkvksgnv

    Sequence, based on observed residues (ATOM records): (download) 
    >1yb0A (A:)
meirkklvvpskygtkcpytmkpkyitvhntyndapaenevnymitnnnevsfhvavddk
qaiqgipwernawacgdgngpgnresisveicysksggdryykaennavdvvrqlmsmyn
ipienvrthqswsgkycphrmlaegrwgafiqkvksg

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1yb0B (B:)
meirkklvvpskygtkcpytmkpkyitvhntyndapaenevnymitnnnevsfhvavddk
qaiqgipwernawacgdgngpgnresisveicysksggdryykaennavdvvrqlmsmyn
ipienvrthqswsgkycphrmlaegrwgafiqkvksgnv

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1yb0C (C:)
meirkklvvpskygtkcpytmkpkyitvhntyndapaenevnymitnnnevsfhvavddk
qaiqgipwernawacgdgngpgnresisveicysksggdryykaennavdvvrqlmsmyn
ipienvrthqswsgkycphrmlaegrwgafiqkvksgnv

    Sequence, based on observed residues (ATOM records): (download) 
    >1yb0C (C:)
meirkklvvpskygtkcpytmkpkyitvhntyndapaenevnymitnnnevsfhvavddk
qaiqgipwernawacgdgngpgnresisveicysksggdryykaennavdvvrqlmsmyn
ipienvrthqswsgkycphrmlaegrwgafiqkvksg