SCOPe 2.07: Structural Classification of Proteins

PDB entry 1yau

View 1yau on RCSB PDB site
Description: Structure of Archeabacterial 20S proteasome- PA26 complex
Class: hydrolase/hydrolase activator
Keywords: proteasome 20S, PA26 proteasome activator 11S, HYDROLASE-HYDROLASE ACTIVATOR COMPLEX
Deposited on 2004-12-17, released 2005-07-26
The last revision prior to the SCOPe 2.07 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-25.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.18
AEROSPACI score: 0.36 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: Proteasome alpha subunit
Species: Thermoplasma acidophilum [TaxId:2303]
Database cross-references and differences (RAF-indexed):
- Uniprot P25156 (Start-232)
Domains in SCOPe 2.07: d1yaua_
Chain 'B':
Compound: Proteasome alpha subunit
Species: Thermoplasma acidophilum [TaxId:2303]
Database cross-references and differences (RAF-indexed):
- Uniprot P25156 (Start-232)
Domains in SCOPe 2.07: d1yaub_
Chain 'C':
Compound: Proteasome alpha subunit
Species: Thermoplasma acidophilum [TaxId:2303]
Database cross-references and differences (RAF-indexed):
- Uniprot P25156 (Start-232)
Domains in SCOPe 2.07: d1yauc_
Chain 'D':
Compound: Proteasome alpha subunit
Species: Thermoplasma acidophilum [TaxId:2303]
Database cross-references and differences (RAF-indexed):
- Uniprot P25156 (Start-232)
Domains in SCOPe 2.07: d1yaud_
Chain 'E':
Compound: Proteasome alpha subunit
Species: Thermoplasma acidophilum [TaxId:2303]
Database cross-references and differences (RAF-indexed):
- Uniprot P25156 (Start-232)
Domains in SCOPe 2.07: d1yaue_
Chain 'F':
Compound: Proteasome alpha subunit
Species: Thermoplasma acidophilum [TaxId:2303]
Database cross-references and differences (RAF-indexed):
- Uniprot P25156 (Start-232)
Domains in SCOPe 2.07: d1yauf_
Chain 'G':
Compound: Proteasome alpha subunit
Species: Thermoplasma acidophilum [TaxId:2303]
Database cross-references and differences (RAF-indexed):
- Uniprot P25156 (Start-232)
Domains in SCOPe 2.07: d1yaug_
Chain 'H':
Compound: Proteasome beta subunit
Species: Thermoplasma acidophilum [TaxId:2303]
Database cross-references and differences (RAF-indexed):
- Uniprot P28061 (Start-210)
Domains in SCOPe 2.07: d1yauh_
Chain 'I':
Compound: Proteasome beta subunit
Species: Thermoplasma acidophilum [TaxId:2303]
Database cross-references and differences (RAF-indexed):
- Uniprot P28061 (Start-210)
Domains in SCOPe 2.07: d1yaui_
Chain 'J':
Compound: Proteasome beta subunit
Species: Thermoplasma acidophilum [TaxId:2303]
Database cross-references and differences (RAF-indexed):
- Uniprot P28061 (Start-210)
Domains in SCOPe 2.07: d1yauj_
Chain 'K':
Compound: Proteasome beta subunit
Species: Thermoplasma acidophilum [TaxId:2303]
Database cross-references and differences (RAF-indexed):
- Uniprot P28061 (Start-210)
Domains in SCOPe 2.07: d1yauk_
Chain 'L':
Compound: Proteasome beta subunit
Species: Thermoplasma acidophilum [TaxId:2303]
Database cross-references and differences (RAF-indexed):
- Uniprot P28061 (Start-210)
Domains in SCOPe 2.07: d1yaul_
Chain 'M':
Compound: Proteasome beta subunit
Species: Thermoplasma acidophilum [TaxId:2303]
Database cross-references and differences (RAF-indexed):
- Uniprot P28061 (Start-210)
Domains in SCOPe 2.07: d1yaum_
Chain 'N':
Compound: Proteasome beta subunit
Species: Thermoplasma acidophilum [TaxId:2303]
Database cross-references and differences (RAF-indexed):
- Uniprot P28061 (Start-210)
Domains in SCOPe 2.07: d1yaun_
Chain 'O':
Compound: proteasome activator protein PA26
Species: Trypanosoma brucei [TaxId:5691]
Database cross-references and differences (RAF-indexed):
- GB AAD50581 (Start-236)
  - variant (54)
Domains in SCOPe 2.07: d1yauo_
Chain 'P':
Compound: proteasome activator protein PA26
Species: Trypanosoma brucei [TaxId:5691]
Database cross-references and differences (RAF-indexed):
- GB AAD50581 (Start-236)
  - variant (54)
Domains in SCOPe 2.07: d1yaup_
Chain 'Q':
Compound: proteasome activator protein PA26
Species: Trypanosoma brucei [TaxId:5691]
Database cross-references and differences (RAF-indexed):
- GB AAD50581 (Start-236)
  - variant (54)
Domains in SCOPe 2.07: d1yauq_
Chain 'R':
Compound: proteasome activator protein PA26
Species: Trypanosoma brucei [TaxId:5691]
Database cross-references and differences (RAF-indexed):
- GB AAD50581 (Start-236)
  - variant (54)
Domains in SCOPe 2.07: d1yaur_
Chain 'S':
Compound: proteasome activator protein PA26
Species: Trypanosoma brucei [TaxId:5691]
Database cross-references and differences (RAF-indexed):
- GB AAD50581 (Start-236)
  - variant (54)
Domains in SCOPe 2.07: d1yaus_
Chain 'T':
Compound: proteasome activator protein PA26
Species: Trypanosoma brucei [TaxId:5691]
Database cross-references and differences (RAF-indexed):
- GB AAD50581 (Start-236)
  - variant (54)
Domains in SCOPe 2.07: d1yaut_
Chain 'U':
Compound: proteasome activator protein PA26
Species: Trypanosoma brucei [TaxId:5691]
Database cross-references and differences (RAF-indexed):
- GB AAD50581 (Start-236)
  - variant (54)
Domains in SCOPe 2.07: d1yauu_
Heterogens: SO4, GOL, HOH

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>1yauA (A:)
mqqgqmaggraitvfspdgrlfqveyareavkkgstalgmkfangvllisdkkvrsrlie
qnsiekiqliddyvaavtsglvadarvlvdfarisaqqekvtygslvnienlvkrvadqm
qqytqyggvrpygvslifagidqigprlfdcdpagtineykataigsgkdavvsflerey
kenlpekeavtlgikalkssleegeelkapeiasitvgnkyriydqeevkkfl