PDB entry 1yai

View 1yai on RCSB PDB site
Description: x-ray structure of a bacterial copper,zinc superoxide dismutase
Class: oxidoreductase
Keywords: oxidoreductase, beta-barrel, metalloenzyme, macromolecular assembly
Deposited on 1996-02-03, released 1997-08-20
The last revision prior to the SCOP 1.73 freeze date was dated 1997-08-20, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.149
AEROSPACI score: 0.49 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: copper, zinc superoxide dismutase
    Species: Photobacterium leiognathi
    Gene: PHSOD
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1yaia_
  • Chain 'B':
    Compound: copper, zinc superoxide dismutase
    Species: Photobacterium leiognathi
    Gene: PHSOD
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1yaib_
  • Chain 'C':
    Compound: copper, zinc superoxide dismutase
    Species: Photobacterium leiognathi
    Gene: PHSOD
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1yaic_
  • Heterogens: CU, ZN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1yaiA (A:)
qdltvkmtdlqtgkpvgtielsqnkygvvftpeladltpgmhgfhihqngscassekdgk
vvlggaagghydpehtnkhgfpwtddnhkgdlpalfvsanglatnpvlaprltlkelkgh
aimihaggdnhsdmpkalggggarvacgviq

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1yaiB (B:)
qdltvkmtdlqtgkpvgtielsqnkygvvftpeladltpgmhgfhihqngscassekdgk
vvlggaagghydpehtnkhgfpwtddnhkgdlpalfvsanglatnpvlaprltlkelkgh
aimihaggdnhsdmpkalggggarvacgviq

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1yaiC (C:)
qdltvkmtdlqtgkpvgtielsqnkygvvftpeladltpgmhgfhihqngscassekdgk
vvlggaagghydpehtnkhgfpwtddnhkgdlpalfvsanglatnpvlaprltlkelkgh
aimihaggdnhsdmpkalggggarvacgviq

    Sequence, based on observed residues (ATOM records): (download) 
    >1yaiC (C:)
dltvkmtdlqtgkpvgtielsqnkygvvftpeladltpgmhgfhihqngscassekdgkv
vlggaagghydpehtnkhgfpwtddnhkgdlpalfvsanglatnpvlaprltlkelkgha
imihaggdnhsdmpkalggggarvacgviq