PDB entry 1y7m
View 1y7m on RCSB PDB site
Description: Crystal Structure of the B. subtilis YkuD protein at 2 A resolution
Class: structural genomics, unknown function
Keywords: surface mutagenesis, cysteine proteases, cell wall catabolism, Structural Genomics, PSI, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, UNKNOWN FUNCTION
Deposited on
2004-12-09, released
2005-03-01
The last revision prior to the SCOPe 2.08 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 2.05 Å
R-factor: 0.214
AEROSPACI score: 0.39
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: hypothetical protein BSU14040
Species: Bacillus subtilis [TaxId:224308]
Gene: ykud
Database cross-references and differences (RAF-indexed):
- Uniprot O34816 (0-163)
- modified residue (0)
- modified residue (75)
- engineered (116-117)
- modified residue (141)
Domains in SCOPe 2.08: d1y7ma1, d1y7ma2 - Chain 'B':
Compound: hypothetical protein BSU14040
Species: Bacillus subtilis [TaxId:224308]
Gene: ykud
Database cross-references and differences (RAF-indexed):
- Uniprot O34816 (0-163)
- modified residue (0)
- modified residue (75)
- engineered (116-117)
- modified residue (141)
Domains in SCOPe 2.08: d1y7mb1, d1y7mb2 - Heterogens: CD, SO4, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>1y7mA (A:)
mltyqvkqgdtlnsiaadfristaallqanpslqagltagqsivipglpdpytipyhiav
sigaktltlslnnrvmktypiavgkiltqtptgefyiinrqrnpggpfgaywlslsaahy
gihgtnnpasigkavskgcirmhnkdvielasivpngtrvtinr
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>1y7mB (B:)
mltyqvkqgdtlnsiaadfristaallqanpslqagltagqsivipglpdpytipyhiav
sigaktltlslnnrvmktypiavgkiltqtptgefyiinrqrnpggpfgaywlslsaahy
gihgtnnpasigkavskgcirmhnkdvielasivpngtrvtinr