PDB entry 1y5b

View 1y5b on RCSB PDB site
Description: Dianhydrosugar-based benzamidine, factor Xa specific inhibitor in complex with bovine trypsin mutant
Class: Hydrolase
Keywords: Hydrolase, Serine protease, Serine proteinase
Deposited on 2004-12-02, released 2005-12-13
The last revision prior to the SCOPe 2.06 freeze date was dated 2008-10-07, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 1.65 Å
R-factor: 0.162
AEROSPACI score: 0.58 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'T':
    Compound: Trypsin, cationic
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P00760 (0-222)
      • engineered (78)
      • engineered (80)
    Domains in SCOPe 2.06: d1y5bt_
  • Heterogens: SO4, CA, TL3, IMD, HOH

PDB Chain Sequences:

  • Chain 'T':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1y5bT (T:)
    ivggytcgantvpyqvslnsgyhfcggslinsqwvvsaahcyksgiqvrlgedninvveg
    neqfisasksivhpsynsetynndimliklksaaslnsrvasislptscasagtqclisg
    wgntkssgtsypdvlkclkapilsdsscksaypgqitsnmfcagyleggkdscqgdsggp
    vvcsgklqgivswgsgcaqknkpgvytkvcnyvswikqtiasn