PDB entry 1y28

View 1y28 on RCSB PDB site
Description: Crystal structure of the R220A metBJFIXL HEME domain
Class: transferase
Keywords: pas fold, oxygen sensing, transferase
Deposited on 2004-11-21, released 2004-12-07
The last revision prior to the SCOPe 2.07 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.251
AEROSPACI score: 0.36 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: sensor protein fixl
    Species: BRADYRHIZOBIUM JAPONICUM [TaxId:375]
    Gene: fixL
    Database cross-references and differences (RAF-indexed):
    • Uniprot P23222 (12-130)
      • engineered (80)
    Domains in SCOPe 2.07: d1y28a_
  • Heterogens: HEM, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1y28A (A:)
    mrethlrsilhtipdamividghgiiqlfstaaerlfgwseleaigqnvnilmpepdrsr
    hdsyisryrttsdphiigigaivtgkrrdgttfpmhlsigemqsggepyftgfvrdlteh
    qqtqarlqelq
    

    Sequence, based on observed residues (ATOM records): (download)
    >1y28A (A:)
    ipdamividghgiiqlfstaaerlfgwseleaigqnvnilmpepdrsrhdsyisryrtts
    dphiigigaivtgkrrdgttfpmhlsigemqsggepyftgfvrdltehqqtqarlqelq