PDB entry 1y1m

View 1y1m on RCSB PDB site
Description: Crystal structure of the NR1 ligand binding core in complex with cycloleucine
Class: ligand binding protein
Keywords: Protein-ligand complex; ligand-binding complex
Deposited on 2004-11-18, released 2005-07-12
The last revision prior to the SCOP 1.73 freeze date was dated 2005-07-12, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: 0.187
AEROSPACI score: 0.51 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Glutamate [NMDA] receptor subunit zeta 1
    Species: Rattus norvegicus
    Database cross-references and differences (RAF-indexed):
    • Uniprot P35439 (Start-151)
      • insertion (152-153)
    • Uniprot P35439 (154-End)
    Domains in SCOP 1.73: d1y1ma1
  • Chain 'B':
    Compound: Glutamate [NMDA] receptor subunit zeta 1
    Species: Rattus norvegicus
    Database cross-references and differences (RAF-indexed):
    • Uniprot P35439 (Start-151)
      • insertion (152-153)
    • Uniprot P35439 (154-End)
    Domains in SCOP 1.73: d1y1mb1
  • Heterogens: AC5, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1y1mA (A:)
gmstrlkivtihqepfvyvkptmsdgtckeeftvngdpvkkvictgpndtspgsprhtvp
qccygfcidlliklartmnftyevhlvadgkfgtqervnnsnkkewngmmgellsgqadm
ivapltinneraqyiefskpfkyqgltilvkkgtritgindprlrnpsdkfiyatvkqss
vdiyfrrqvelstmyrhmekhnyesaaeaiqavrdnklhafiwdsavlefeasqkcdlvt
tgelffrsgfgigmrkdspwkqnvslsilkshengfmedldktwvryqecds

    Sequence, based on observed residues (ATOM records): (download) 
    >1y1mA (A:)
rlkivtihqepfvyvkptmsdgtckeeftvngdpvkkvictgptvpqccygfcidllikl
artmnftyevhlvadgkfgtqervnnsnkkewngmmgellsgqadmivapltinneraqy
iefskpfkyqgltilvkkgtritgindprlrnpsdkfiyatvkqssvdiyfrrqvelstm
yrhmekhnyesaaeaiqavrdnklhafiwdsavlefeasqkcdlvttgelffrsgfgigm
rkdspwkqnvslsilkshengfmedldktwv

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1y1mB (B:)
gmstrlkivtihqepfvyvkptmsdgtckeeftvngdpvkkvictgpndtspgsprhtvp
qccygfcidlliklartmnftyevhlvadgkfgtqervnnsnkkewngmmgellsgqadm
ivapltinneraqyiefskpfkyqgltilvkkgtritgindprlrnpsdkfiyatvkqss
vdiyfrrqvelstmyrhmekhnyesaaeaiqavrdnklhafiwdsavlefeasqkcdlvt
tgelffrsgfgigmrkdspwkqnvslsilkshengfmedldktwvryqecds

    Sequence, based on observed residues (ATOM records): (download) 
    >1y1mB (B:)
rlkivtihqepfvyvkptmsdgtckeeftvngdpvkkvictgptvpqccygfcidllikl
artmnftyevhlvadgkfgtqekewngmmgellsgqadmivapltinneraqyiefskpf
kyqgltilvkkgtritgindprlrnpsdkfiyatvkqssvdiyfrrqvelstmyrhmekh
nyesaaeaiqavrdnklhafiwdsavlefeasqkcdlvttgelffrsgfgigmrkdspwk
qnvslsilkshengfmedldktwv