PDB entry 1y0j

View 1y0j on RCSB PDB site
Description: Zinc fingers as protein recognition motifs: structural basis for the GATA-1/Friend of GATA interaction
Class: DNA binding protein
Keywords: zinc finger, GATA-1, FOG, protein-protein complex, DNA BINDING PROTEIN
Deposited on 2004-11-15, released 2005-01-25
The last revision prior to the SCOPe 2.07 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: NMR
Resolution: N/A
R-factor: N/A
AEROSPACI score: 0.03 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Erythroid transcription factor
    Species: Mus musculus [TaxId:10090]
    Gene: gata-1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1y0ja_
  • Chain 'B':
    Compound: Zinc-finger protein ush
    Species: Drosophila melanogaster [TaxId:7227]
    Gene: U-shaped
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9VPQ6 (2-35)
      • expression tag (0-1)
    Domains in SCOPe 2.07: d1y0jb2, d1y0jb3
  • Heterogens: ZN

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1y0jA (A:)
    gsearecvncgatatplwrrdrtghylcnacglyhkmngqnrplir
    

    Sequence, based on observed residues (ATOM records): (download)
    >1y0jA (A:)
    earecvncgatatplwrrdrtghylcnacglyhkmngqn
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1y0jB (B:)
    gsllkparfmclpcgiafsspstleahqayycshri