PDB entry 1xx6
View 1xx6 on RCSB PDB site
Description: X-ray structure of Clostridium acetobutylicum thymidine kinase with ADP. Northeast Structural Genomics Target CAR26.
Class: transferase
Keywords: X-ray, NESG, Northeast Structural Genomics Consortium, Protein Structure Initiative, PSI, Structural Genomics, DNA synthesis,
kinase, transferase, thymidine
Deposited on
2004-11-04, released
2004-12-21
The last revision prior to the SCOP 1.73 freeze date was dated
2005-01-18, with a file datestamp of
2007-06-04.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.241
AEROSPACI score: 0.4
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Thymidine kinase
Species: Clostridium acetobutylicum ATCC 824
Database cross-references and differences (RAF-indexed):
- Uniprot Q97F65 (Start-190)
- modified residue (16)
- modified residue (58)
- modified residue (117)
- modified residue (131)
- modified residue (175)
Domains in SCOP 1.73: d1xx6a1, d1xx6a2 - Chain 'B':
Compound: Thymidine kinase
Species: Clostridium acetobutylicum ATCC 824
Database cross-references and differences (RAF-indexed):
- Uniprot Q97F65 (Start-190)
- modified residue (16)
- modified residue (117)
- modified residue (131)
- modified residue (175)
Domains in SCOP 1.73: d1xx6b1, d1xx6b2 - Heterogens: ZN, ADP, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1xx6A (A:)
myrpkdhgwvevivgpmysgkseelirrirrakiakqkiqvfkpeidnryskedvvshmg
ekeqavaiknsreilkyfeedteviaidevqffddeiveivnkiaesgrrvicagldmdf
rgkpfgpipelmaiaefvdkiqaicvvcgnpatrtqrlingkpafyddpvvligamesye
arcrkchvvpq
Sequence, based on observed residues (ATOM records): (download)
>1xx6A (A:)
yrpkdhgwvevivgpmysgkseelirrirrakiakqkiqvfkpeedvvshmgekeqavai
knsreilkyfeedteviaidevqffddeiveivnkiaesgrrvicagldmdfrgkpfgpi
pelmaiaefvdkiqaicvvcgnpatrtqrlingkpafyddpvmesyearcrkchvvpq
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1xx6B (B:)
myrpkdhgwvevivgpmysgkseelirrirrakiakqkiqvfkpeidnryskedvvshmg
ekeqavaiknsreilkyfeedteviaidevqffddeiveivnkiaesgrrvicagldmdf
rgkpfgpipelmaiaefvdkiqaicvvcgnpatrtqrlingkpafyddpvvligamesye
arcrkchvvpq
Sequence, based on observed residues (ATOM records): (download)
>1xx6B (B:)
yrpkdhgwvevivgpmysgkseelirrirrakiakqkiqvfkpeavaiknsreilkyfee
dteviaidevqffddeiveivnkiaesgrrvicagldmdfrgkpfgpipelmaiaefvdk
iqaicvvcgnpatrtqrlingkpafyddpvmesyearcrkchvvpq