PDB entry 1xu2
View 1xu2 on RCSB PDB site
Description: The crystal structure of APRIL bound to BCMA
Class: CYTOKINE, HORMONE/GROWTH FACTOR receptor
Keywords: TNFSF, cytokine, CRD, receptor, jelly-roll, cysteine-rich, HORMONE-GROWTH FACTOR receptor COMPLEX
Deposited on
2004-10-25, released
2004-11-09
The last revision prior to the SCOPe 2.05 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-08.
Experiment type: XRAY
Resolution: 2.35 Å
R-factor: 0.182
AEROSPACI score: 0.36
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Tumor necrosis factor ligand superfamily member 13
Species: Mus musculus [TaxId:10090]
Gene: Tnfsf13, APRIL
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d1xu2a_ - Chain 'B':
Compound: Tumor necrosis factor ligand superfamily member 13
Species: Mus musculus [TaxId:10090]
Gene: Tnfsf13, APRIL
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d1xu2b_ - Chain 'D':
Compound: Tumor necrosis factor ligand superfamily member 13
Species: Mus musculus [TaxId:10090]
Gene: Tnfsf13, APRIL
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d1xu2d_ - Chain 'R':
Compound: Tumor necrosis factor receptor superfamily member 17
Species: Homo sapiens [TaxId:9606]
Gene: TNFRSF17, BCM, BCMA
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d1xu2r_ - Chain 'S':
Compound: Tumor necrosis factor receptor superfamily member 17
Species: Homo sapiens [TaxId:9606]
Gene: TNFRSF17, BCM, BCMA
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d1xu2s_ - Chain 'T':
Compound: Tumor necrosis factor receptor superfamily member 17
Species: Homo sapiens [TaxId:9606]
Gene: TNFRSF17, BCM, BCMA
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d1xu2t_ - Heterogens: NI, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1xu2A (A:)
kkhsvlhlvpvnitskadsdvtevmwqpvlrrgrgleaqgdivrvwdtgiyllysqvlfh
dvtftmgqvvsregqgrretlfrcirsmpsdpdraynscysagvfhlhqgdiitvkipra
naklslsphgtflgfvkl
Sequence, based on observed residues (ATOM records): (download)
>1xu2A (A:)
khsvlhlvpvnitskadsdvtevmwqpvlrrgrgleaqgdivrvwdtgiyllysqvlfhd
vtftmgqvvsregqgrretlfrcirsmpsdpdraynscysagvfhlhqgdiitvkipran
aklslsphgtflgfvkl
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1xu2B (B:)
kkhsvlhlvpvnitskadsdvtevmwqpvlrrgrgleaqgdivrvwdtgiyllysqvlfh
dvtftmgqvvsregqgrretlfrcirsmpsdpdraynscysagvfhlhqgdiitvkipra
naklslsphgtflgfvkl
Sequence, based on observed residues (ATOM records): (download)
>1xu2B (B:)
khsvlhlvpvnitskadsdvtevmwqpvlrrgrgleaqgdivrvwdtgiyllysqvlfhd
vtftmgqvvsregqgrretlfrcirsmpsdpdraynscysagvfhlhqgdiitvkipran
aklslsphgtflgfvkl
- Chain 'D':
Sequence, based on SEQRES records: (download)
>1xu2D (D:)
kkhsvlhlvpvnitskadsdvtevmwqpvlrrgrgleaqgdivrvwdtgiyllysqvlfh
dvtftmgqvvsregqgrretlfrcirsmpsdpdraynscysagvfhlhqgdiitvkipra
naklslsphgtflgfvkl
Sequence, based on observed residues (ATOM records): (download)
>1xu2D (D:)
khsvlhlvpvnitskadsdvtevmwqpvlrrgrgleaqgdivrvwdtgiyllysqvlfhd
vtftmgqvvsregqgrretlfrcirsmpsdpdraynscysagvfhlhqgdiitvkipran
aklslsphgtflgfvkl
- Chain 'R':
Sequence, based on SEQRES records: (download)
>1xu2R (R:)
agqcsqneyfdsllhacipcqlrcssntppltcqrycnasvtnsvkg
Sequence, based on observed residues (ATOM records): (download)
>1xu2R (R:)
csqneyfdsllhacipcqlrcssntppltcqrycna
- Chain 'S':
Sequence, based on SEQRES records: (download)
>1xu2S (S:)
agqcsqneyfdsllhacipcqlrcssntppltcqrycnasvtnsvkg
Sequence, based on observed residues (ATOM records): (download)
>1xu2S (S:)
gqcsqneyfdsllhacipcqlrcssntppltcqrycn
- Chain 'T':
Sequence, based on SEQRES records: (download)
>1xu2T (T:)
agqcsqneyfdsllhacipcqlrcssntppltcqrycnasvtnsvkg
Sequence, based on observed residues (ATOM records): (download)
>1xu2T (T:)
csqneyfdsllhacipcqlrcssntppltcqrycn