SCOP 1.73: Structural Classification of Proteins

PDB entry 1xu1

View 1xu1 on RCSB PDB site
Description: The crystal structure of APRIL bound to TACI
Class: CYTOKINE, HORMONE/GROWTH FACTOR receptor
Keywords: TNFSF, cytokine, CRD, receptor, jelly-roll, cysteine-rich
Deposited on 2004-10-25, released 2004-11-09
The last revision prior to the SCOP 1.73 freeze date was dated 2005-03-22, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.171
AEROSPACI score: 0.49 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: Tumor necrosis factor ligand superfamily member 13
Species: MUS MUSCULUS
Gene: Tnfsf13, APRIL
Database cross-references and differences (RAF-indexed):
- Uniprot Q9D777 (Start-137)
Domains in SCOP 1.73: d1xu1a_
Chain 'B':
Compound: Tumor necrosis factor ligand superfamily member 13
Species: MUS MUSCULUS
Gene: Tnfsf13, APRIL
Database cross-references and differences (RAF-indexed):
- Uniprot Q9D777 (Start-137)
Domains in SCOP 1.73: d1xu1b_
Chain 'D':
Compound: Tumor necrosis factor ligand superfamily member 13
Species: MUS MUSCULUS
Gene: Tnfsf13, APRIL
Database cross-references and differences (RAF-indexed):
- Uniprot Q9D777 (Start-137)
Domains in SCOP 1.73: d1xu1d_
Chain 'R':
Compound: Tumor necrosis factor receptor superfamily member 13B
Species: HOMO SAPIENS
Gene: TNFRSF13B, TACI
Database cross-references and differences (RAF-indexed):
- Uniprot O14836 (0-End)
Domains in SCOP 1.73: d1xu1r_
Chain 'S':
Compound: Tumor necrosis factor receptor superfamily member 13B
Species: HOMO SAPIENS
Gene: TNFRSF13B, TACI
Database cross-references and differences (RAF-indexed):
- Uniprot O14836
Domains in SCOP 1.73: d1xu1s_
Chain 'T':
Compound: Tumor necrosis factor receptor superfamily member 13B
Species: HOMO SAPIENS
Gene: TNFRSF13B, TACI
Database cross-references and differences (RAF-indexed):
- Uniprot O14836 (Start-41)
Domains in SCOP 1.73: d1xu1t_
Heterogens: NI, HOH

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>1xu1A (A:)
kkhsvlhlvpvnitskadsdvtevmwqpvlrrgrgleaqgdivrvwdtgiyllysqvlfh
dvtftmgqvvsregqgrretlfrcirsmpsdpdraynscysagvfhlhqgdiitvkipra
naklslsphgtflgfvkl

Sequence, based on observed residues (ATOM records): (download)

>1xu1A (A:)
khsvlhlvpvnitskadsdvtevmwqpvlrrgrgleaqgdivrvwdtgiyllysqvlfhd
vtftmgqvvsregqgrretlfrcirsmpsdpdraynscysagvfhlhqgdiitvkipran
aklslsphgtflgfvkl

Chain 'B':
Sequence, based on SEQRES records: (download)

>1xu1B (B:)
kkhsvlhlvpvnitskadsdvtevmwqpvlrrgrgleaqgdivrvwdtgiyllysqvlfh
dvtftmgqvvsregqgrretlfrcirsmpsdpdraynscysagvfhlhqgdiitvkipra
naklslsphgtflgfvkl

Sequence, based on observed residues (ATOM records): (download)

>1xu1B (B:)
khsvlhlvpvnitskadsdvtevmwqpvlrrgrgleaqgdivrvwdtgiyllysqvlfhd
vtftmgqvvsregqgrretlfrcirsmpsdpdraynscysagvfhlhqgdiitvkipran
aklslsphgtflgfvkl

Chain 'D':
Sequence, based on SEQRES records: (download)

>1xu1D (D:)
kkhsvlhlvpvnitskadsdvtevmwqpvlrrgrgleaqgdivrvwdtgiyllysqvlfh
dvtftmgqvvsregqgrretlfrcirsmpsdpdraynscysagvfhlhqgdiitvkipra
naklslsphgtflgfvkl

Sequence, based on observed residues (ATOM records): (download)

>1xu1D (D:)
khsvlhlvpvnitskadsdvtevmwqpvlrrgrgleaqgdivrvwdtgiyllysqvlfhd
vtftmgqvvsregqgrretlfrcirsmpsdpdraynscysagvfhlhqgdiitvkipran
aklslsphgtflgfvkl

Chain 'R':
Sequence, based on SEQRES records: (download)
```
>1xu1R (R:)
slscrkeqgkfydhllrdciscasicgqhpkqcayfcenklr
```
Sequence, based on observed residues (ATOM records): (download)
```
>1xu1R (R:)
slscrkeqgkfydhllrdciscasicgqhpkqcayfce
```
Chain 'S':
Sequence, based on SEQRES records: (download)
```
>1xu1S (S:)
slscrkeqgkfydhllrdciscasicgqhpkqcayfcenklr
```
Sequence, based on observed residues (ATOM records): (download)
```
>1xu1S (S:)
crkeqgkfydhllrdciscasicgqhpkqcayfcen
```
Chain 'T':
Sequence, based on SEQRES records: (download)
```
>1xu1T (T:)
slscrkeqgkfydhllrdciscasicgqhpkqcayfcenklr
```
Sequence, based on observed residues (ATOM records): (download)
```
>1xu1T (T:)
crkeqgkfydhllrdciscasicgqhpkqcayfcenklr
```