PDB entry 1xsj

View 1xsj on RCSB PDB site
Description: Structure of a Family 31 alpha glycosidase
Class: hydrolase
Keywords: beta(8)alpha(8) barrel and beta sandwich domains, hydrolase
Deposited on 2004-10-19, released 2004-10-26
The last revision prior to the SCOPe 2.07 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.18
AEROSPACI score: 0.42 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Putative family 31 glucosidase yicI
    Species: Escherichia coli [TaxId:562]
    Gene: yicI
    Database cross-references and differences (RAF-indexed):
    • Uniprot P31434 (0-771)
      • expression tag (772)
    Domains in SCOPe 2.07: d1xsja1, d1xsja2, d1xsja3, d1xsja4, d1xsja5
  • Chain 'B':
    Compound: Putative family 31 glucosidase yicI
    Species: Escherichia coli [TaxId:562]
    Gene: yicI
    Database cross-references and differences (RAF-indexed):
    • Uniprot P31434 (0-771)
      • expression tag (772)
    Domains in SCOPe 2.07: d1xsjb1, d1xsjb2, d1xsjb3, d1xsjb4, d1xsjb5
  • Chain 'C':
    Compound: Putative family 31 glucosidase yicI
    Species: Escherichia coli [TaxId:562]
    Gene: yicI
    Database cross-references and differences (RAF-indexed):
    • Uniprot P31434 (0-771)
      • expression tag (772)
    Domains in SCOPe 2.07: d1xsjc1, d1xsjc2, d1xsjc3, d1xsjc4, d1xsjc5
  • Chain 'D':
    Compound: Putative family 31 glucosidase yicI
    Species: Escherichia coli [TaxId:562]
    Gene: yicI
    Database cross-references and differences (RAF-indexed):
    • Uniprot P31434 (0-771)
      • expression tag (772)
    Domains in SCOPe 2.07: d1xsjd1, d1xsjd2, d1xsjd3, d1xsjd4, d1xsjd5
  • Chain 'E':
    Compound: Putative family 31 glucosidase yicI
    Species: Escherichia coli [TaxId:562]
    Gene: yicI
    Database cross-references and differences (RAF-indexed):
    • Uniprot P31434 (0-771)
      • expression tag (772)
    Domains in SCOPe 2.07: d1xsje1, d1xsje2, d1xsje3, d1xsje4, d1xsje5
  • Chain 'F':
    Compound: Putative family 31 glucosidase yicI
    Species: Escherichia coli [TaxId:562]
    Gene: yicI
    Database cross-references and differences (RAF-indexed):
    • Uniprot P31434 (0-771)
      • expression tag (772)
    Domains in SCOPe 2.07: d1xsjf1, d1xsjf2, d1xsjf3, d1xsjf4, d1xsjf5
  • Heterogens: TRS, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1xsjA (A:)
    mkisdgnwliqpglnlihplqvfeveqqdnemvvyaaprdvrertwqldtplftlrffsp
    qegivgvriehfqgalnngphyplnilqdvkvtienteryaefksgnlsarvskgefwsl
    dflrngeritgsqvknngyvqdtnnqrnymferldlgvgetvyglgerftalvrngqtve
    twnrdggtsteqayknipfymtnrgygvlvnhpqcvsfevgsekvskvqfsveseyleyf
    vidgptpkavldrytrftgrpalppawsfglwlttsfttnydeatvnsfidgmaernlpl
    hvfhfdcfwmkafqwcdfewdpltfpdpegmirrlkakglkicvwinpyigqkspvfkel
    qekgyllkrpdgslwqwdkwqpglaiydftnpdackwyadklkglvamgvdcfktdfger
    iptdvqwfdgsdpqkmhnhyayiynelvwnvlkdtvgeeeavlfarsasvgaqkfpvhwg
    gdcyanyesmaeslrgglsiglsgfgfwshdiggfentapahvykrwcafgllsshsrlh
    gsksyrvpwayddescdvvrfftqlkcrmmpylyreaaranargtpmmrammmefpddpa
    cdyldrqymlgdnvmvapvfteagdvqfylpegrwthlwhndeldgsrwhkqqhgflslp
    vyvrdntllalgnndqrpdyvwhegtafhlfnlqdgheavcevpaadgsviftlkaartg
    ntitvtgageaknwtlclrnvvkvnglqdgsqaeseqglvvkpqgnaltitlhhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >1xsjA (A:)
    mkisdgnwliqpglnlihplqvfeveqqdnemvvyaaprdvrertwqldtplftlrffsp
    qegivgvriehfqgalnngphyplnilqdvkvtienteryaefksgnlsarvskgefwsl
    dflrngeritgsqvknngyvqdtnnqrnymferldlgvgetvyglgerftalvrngqtve
    twnrdggtsteqayknipfymtnrgygvlvnhpqcvsfevgsekvskvqfsveseyleyf
    vidgptpkavldrytrftgrpalppawsfglwlttsfttnydeatvnsfidgmaernlpl
    hvfhfdcfwmkafqwcdfewdpltfpdpegmirrlkakglkicvwinpyigqkspvfkel
    qekgyllkrpdgslwqwdkwqpglaiydftnpdackwyadklkglvamgvdcfktdfger
    iptdvqwfdgsdpqkmhnhyayiynelvwnvlkdtvgeeeavlfarsasvgaqkfpvhwg
    gdcyanyesmaeslrgglsiglsgfgfwshdiggfentapahvykrwcafgllsshsrlh
    gsksyrvpwayddescdvvrfftqlkcrmmpylyreaaranargtpmmrammmefpddpa
    cdyldrqymlgdnvmvapvfteagdvqfylpegrwthlwhndeldgsrwhkqqhgflslp
    vyvrdntllalgnndqrpdyvwhegtafhlfnlqdgheavcevpaadgsviftlkaartg
    ntitvtgageaknwtlclrnvvkvnglqdgsqaeseqglvvkpqgnaltitlh
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >1xsjB (B:)
    mkisdgnwliqpglnlihplqvfeveqqdnemvvyaaprdvrertwqldtplftlrffsp
    qegivgvriehfqgalnngphyplnilqdvkvtienteryaefksgnlsarvskgefwsl
    dflrngeritgsqvknngyvqdtnnqrnymferldlgvgetvyglgerftalvrngqtve
    twnrdggtsteqayknipfymtnrgygvlvnhpqcvsfevgsekvskvqfsveseyleyf
    vidgptpkavldrytrftgrpalppawsfglwlttsfttnydeatvnsfidgmaernlpl
    hvfhfdcfwmkafqwcdfewdpltfpdpegmirrlkakglkicvwinpyigqkspvfkel
    qekgyllkrpdgslwqwdkwqpglaiydftnpdackwyadklkglvamgvdcfktdfger
    iptdvqwfdgsdpqkmhnhyayiynelvwnvlkdtvgeeeavlfarsasvgaqkfpvhwg
    gdcyanyesmaeslrgglsiglsgfgfwshdiggfentapahvykrwcafgllsshsrlh
    gsksyrvpwayddescdvvrfftqlkcrmmpylyreaaranargtpmmrammmefpddpa
    cdyldrqymlgdnvmvapvfteagdvqfylpegrwthlwhndeldgsrwhkqqhgflslp
    vyvrdntllalgnndqrpdyvwhegtafhlfnlqdgheavcevpaadgsviftlkaartg
    ntitvtgageaknwtlclrnvvkvnglqdgsqaeseqglvvkpqgnaltitlhhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >1xsjB (B:)
    mkisdgnwliqpglnlihplqvfeveqqdnemvvyaaprdvrertwqldtplftlrffsp
    qegivgvriehfqgalnngphyplnilqdvkvtienteryaefksgnlsarvskgefwsl
    dflrngeritgsqvknngyvqdtnnqrnymferldlgvgetvyglgerftalvrngqtve
    twnrdggtsteqayknipfymtnrgygvlvnhpqcvsfevgsekvskvqfsveseyleyf
    vidgptpkavldrytrftgrpalppawsfglwlttsfttnydeatvnsfidgmaernlpl
    hvfhfdcfwmkafqwcdfewdpltfpdpegmirrlkakglkicvwinpyigqkspvfkel
    qekgyllkrpdgslwqwdkwqpglaiydftnpdackwyadklkglvamgvdcfktdfger
    iptdvqwfdgsdpqkmhnhyayiynelvwnvlkdtvgeeeavlfarsasvgaqkfpvhwg
    gdcyanyesmaeslrgglsiglsgfgfwshdiggfentapahvykrwcafgllsshsrlh
    gsksyrvpwayddescdvvrfftqlkcrmmpylyreaaranargtpmmrammmefpddpa
    cdyldrqymlgdnvmvapvfteagdvqfylpegrwthlwhndeldgsrwhkqqhgflslp
    vyvrdntllalgnndqrpdyvwhegtafhlfnlqdgheavcevpaadgsviftlkaartg
    ntitvtgageaknwtlclrnvvkvnglqdgsqaeseqglvvkpqgnaltitlh
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >1xsjC (C:)
    mkisdgnwliqpglnlihplqvfeveqqdnemvvyaaprdvrertwqldtplftlrffsp
    qegivgvriehfqgalnngphyplnilqdvkvtienteryaefksgnlsarvskgefwsl
    dflrngeritgsqvknngyvqdtnnqrnymferldlgvgetvyglgerftalvrngqtve
    twnrdggtsteqayknipfymtnrgygvlvnhpqcvsfevgsekvskvqfsveseyleyf
    vidgptpkavldrytrftgrpalppawsfglwlttsfttnydeatvnsfidgmaernlpl
    hvfhfdcfwmkafqwcdfewdpltfpdpegmirrlkakglkicvwinpyigqkspvfkel
    qekgyllkrpdgslwqwdkwqpglaiydftnpdackwyadklkglvamgvdcfktdfger
    iptdvqwfdgsdpqkmhnhyayiynelvwnvlkdtvgeeeavlfarsasvgaqkfpvhwg
    gdcyanyesmaeslrgglsiglsgfgfwshdiggfentapahvykrwcafgllsshsrlh
    gsksyrvpwayddescdvvrfftqlkcrmmpylyreaaranargtpmmrammmefpddpa
    cdyldrqymlgdnvmvapvfteagdvqfylpegrwthlwhndeldgsrwhkqqhgflslp
    vyvrdntllalgnndqrpdyvwhegtafhlfnlqdgheavcevpaadgsviftlkaartg
    ntitvtgageaknwtlclrnvvkvnglqdgsqaeseqglvvkpqgnaltitlhhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >1xsjC (C:)
    mkisdgnwliqpglnlihplqvfeveqqdnemvvyaaprdvrertwqldtplftlrffsp
    qegivgvriehfqgalnngphyplnilqdvkvtienteryaefksgnlsarvskgefwsl
    dflrngeritgsqvknngyvqdtnnqrnymferldlgvgetvyglgerftalvrngqtve
    twnrdggtsteqayknipfymtnrgygvlvnhpqcvsfevgsekvskvqfsveseyleyf
    vidgptpkavldrytrftgrpalppawsfglwlttsfttnydeatvnsfidgmaernlpl
    hvfhfdcfwmkafqwcdfewdpltfpdpegmirrlkakglkicvwinpyigqkspvfkel
    qekgyllkrpdgslwqwdkwqpglaiydftnpdackwyadklkglvamgvdcfktdfger
    iptdvqwfdgsdpqkmhnhyayiynelvwnvlkdtvgeeeavlfarsasvgaqkfpvhwg
    gdcyanyesmaeslrgglsiglsgfgfwshdiggfentapahvykrwcafgllsshsrlh
    gsksyrvpwayddescdvvrfftqlkcrmmpylyreaaranargtpmmrammmefpddpa
    cdyldrqymlgdnvmvapvfteagdvqfylpegrwthlwhndeldgsrwhkqqhgflslp
    vyvrdntllalgnndqrpdyvwhegtafhlfnlqdgheavcevpaadgsviftlkaartg
    ntitvtgageaknwtlclrnvvkvnglqdgsqaeseqglvvkpqgnaltitlh
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >1xsjD (D:)
    mkisdgnwliqpglnlihplqvfeveqqdnemvvyaaprdvrertwqldtplftlrffsp
    qegivgvriehfqgalnngphyplnilqdvkvtienteryaefksgnlsarvskgefwsl
    dflrngeritgsqvknngyvqdtnnqrnymferldlgvgetvyglgerftalvrngqtve
    twnrdggtsteqayknipfymtnrgygvlvnhpqcvsfevgsekvskvqfsveseyleyf
    vidgptpkavldrytrftgrpalppawsfglwlttsfttnydeatvnsfidgmaernlpl
    hvfhfdcfwmkafqwcdfewdpltfpdpegmirrlkakglkicvwinpyigqkspvfkel
    qekgyllkrpdgslwqwdkwqpglaiydftnpdackwyadklkglvamgvdcfktdfger
    iptdvqwfdgsdpqkmhnhyayiynelvwnvlkdtvgeeeavlfarsasvgaqkfpvhwg
    gdcyanyesmaeslrgglsiglsgfgfwshdiggfentapahvykrwcafgllsshsrlh
    gsksyrvpwayddescdvvrfftqlkcrmmpylyreaaranargtpmmrammmefpddpa
    cdyldrqymlgdnvmvapvfteagdvqfylpegrwthlwhndeldgsrwhkqqhgflslp
    vyvrdntllalgnndqrpdyvwhegtafhlfnlqdgheavcevpaadgsviftlkaartg
    ntitvtgageaknwtlclrnvvkvnglqdgsqaeseqglvvkpqgnaltitlhhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >1xsjD (D:)
    mkisdgnwliqpglnlihplqvfeveqqdnemvvyaaprdvrertwqldtplftlrffsp
    qegivgvriehfqgalnngphyplnilqdvkvtienteryaefksgnlsarvskgefwsl
    dflrngeritgsqvknngyvqdtnnqrnymferldlgvgetvyglgerftalvrngqtve
    twnrdggtsteqayknipfymtnrgygvlvnhpqcvsfevgsekvskvqfsveseyleyf
    vidgptpkavldrytrftgrpalppawsfglwlttsfttnydeatvnsfidgmaernlpl
    hvfhfdcfwmkafqwcdfewdpltfpdpegmirrlkakglkicvwinpyigqkspvfkel
    qekgyllkrpdgslwqwdkwqpglaiydftnpdackwyadklkglvamgvdcfktdfger
    iptdvqwfdgsdpqkmhnhyayiynelvwnvlkdtvgeeeavlfarsasvgaqkfpvhwg
    gdcyanyesmaeslrgglsiglsgfgfwshdiggfentapahvykrwcafgllsshsrlh
    gsksyrvpwayddescdvvrfftqlkcrmmpylyreaaranargtpmmrammmefpddpa
    cdyldrqymlgdnvmvapvfteagdvqfylpegrwthlwhndeldgsrwhkqqhgflslp
    vyvrdntllalgnndqrpdyvwhegtafhlfnlqdgheavcevpaadgsviftlkaartg
    ntitvtgageaknwtlclrnvvkvnglqdgsqaeseqglvvkpqgnaltitlh
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >1xsjE (E:)
    mkisdgnwliqpglnlihplqvfeveqqdnemvvyaaprdvrertwqldtplftlrffsp
    qegivgvriehfqgalnngphyplnilqdvkvtienteryaefksgnlsarvskgefwsl
    dflrngeritgsqvknngyvqdtnnqrnymferldlgvgetvyglgerftalvrngqtve
    twnrdggtsteqayknipfymtnrgygvlvnhpqcvsfevgsekvskvqfsveseyleyf
    vidgptpkavldrytrftgrpalppawsfglwlttsfttnydeatvnsfidgmaernlpl
    hvfhfdcfwmkafqwcdfewdpltfpdpegmirrlkakglkicvwinpyigqkspvfkel
    qekgyllkrpdgslwqwdkwqpglaiydftnpdackwyadklkglvamgvdcfktdfger
    iptdvqwfdgsdpqkmhnhyayiynelvwnvlkdtvgeeeavlfarsasvgaqkfpvhwg
    gdcyanyesmaeslrgglsiglsgfgfwshdiggfentapahvykrwcafgllsshsrlh
    gsksyrvpwayddescdvvrfftqlkcrmmpylyreaaranargtpmmrammmefpddpa
    cdyldrqymlgdnvmvapvfteagdvqfylpegrwthlwhndeldgsrwhkqqhgflslp
    vyvrdntllalgnndqrpdyvwhegtafhlfnlqdgheavcevpaadgsviftlkaartg
    ntitvtgageaknwtlclrnvvkvnglqdgsqaeseqglvvkpqgnaltitlhhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >1xsjE (E:)
    mkisdgnwliqpglnlihplqvfeveqqdnemvvyaaprdvrertwqldtplftlrffsp
    qegivgvriehfqgalnngphyplnilqdvkvtienteryaefksgnlsarvskgefwsl
    dflrngeritgsqvknngyvqdtnnqrnymferldlgvgetvyglgerftalvrngqtve
    twnrdggtsteqayknipfymtnrgygvlvnhpqcvsfevgsekvskvqfsveseyleyf
    vidgptpkavldrytrftgrpalppawsfglwlttsfttnydeatvnsfidgmaernlpl
    hvfhfdcfwmkafqwcdfewdpltfpdpegmirrlkakglkicvwinpyigqkspvfkel
    qekgyllkrpdgslwqwdkwqpglaiydftnpdackwyadklkglvamgvdcfktdfger
    iptdvqwfdgsdpqkmhnhyayiynelvwnvlkdtvgeeeavlfarsasvgaqkfpvhwg
    gdcyanyesmaeslrgglsiglsgfgfwshdiggfentapahvykrwcafgllsshsrlh
    gsksyrvpwayddescdvvrfftqlkcrmmpylyreaaranargtpmmrammmefpddpa
    cdyldrqymlgdnvmvapvfteagdvqfylpegrwthlwhndeldgsrwhkqqhgflslp
    vyvrdntllalgnndqrpdyvwhegtafhlfnlqdgheavcevpaadgsviftlkaartg
    ntitvtgageaknwtlclrnvvkvnglqdgsqaeseqglvvkpqgnaltitlh
    

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >1xsjF (F:)
    mkisdgnwliqpglnlihplqvfeveqqdnemvvyaaprdvrertwqldtplftlrffsp
    qegivgvriehfqgalnngphyplnilqdvkvtienteryaefksgnlsarvskgefwsl
    dflrngeritgsqvknngyvqdtnnqrnymferldlgvgetvyglgerftalvrngqtve
    twnrdggtsteqayknipfymtnrgygvlvnhpqcvsfevgsekvskvqfsveseyleyf
    vidgptpkavldrytrftgrpalppawsfglwlttsfttnydeatvnsfidgmaernlpl
    hvfhfdcfwmkafqwcdfewdpltfpdpegmirrlkakglkicvwinpyigqkspvfkel
    qekgyllkrpdgslwqwdkwqpglaiydftnpdackwyadklkglvamgvdcfktdfger
    iptdvqwfdgsdpqkmhnhyayiynelvwnvlkdtvgeeeavlfarsasvgaqkfpvhwg
    gdcyanyesmaeslrgglsiglsgfgfwshdiggfentapahvykrwcafgllsshsrlh
    gsksyrvpwayddescdvvrfftqlkcrmmpylyreaaranargtpmmrammmefpddpa
    cdyldrqymlgdnvmvapvfteagdvqfylpegrwthlwhndeldgsrwhkqqhgflslp
    vyvrdntllalgnndqrpdyvwhegtafhlfnlqdgheavcevpaadgsviftlkaartg
    ntitvtgageaknwtlclrnvvkvnglqdgsqaeseqglvvkpqgnaltitlhhhhhh
    

    Sequence, based on observed residues (ATOM records): (download)
    >1xsjF (F:)
    mkisdgnwliqpglnlihplqvfeveqqdnemvvyaaprdvrertwqldtplftlrffsp
    qegivgvriehfqgalnngphyplnilqdvkvtienteryaefksgnlsarvskgefwsl
    dflrngeritgsqvknngyvqdtnnqrnymferldlgvgetvyglgerftalvrngqtve
    twnrdggtsteqayknipfymtnrgygvlvnhpqcvsfevgsekvskvqfsveseyleyf
    vidgptpkavldrytrftgrpalppawsfglwlttsfttnydeatvnsfidgmaernlpl
    hvfhfdcfwmkafqwcdfewdpltfpdpegmirrlkakglkicvwinpyigqkspvfkel
    qekgyllkrpdgslwqwdkwqpglaiydftnpdackwyadklkglvamgvdcfktdfger
    iptdvqwfdgsdpqkmhnhyayiynelvwnvlkdtvgeeeavlfarsasvgaqkfpvhwg
    gdcyanyesmaeslrgglsiglsgfgfwshdiggfentapahvykrwcafgllsshsrlh
    gsksyrvpwayddescdvvrfftqlkcrmmpylyreaaranargtpmmrammmefpddpa
    cdyldrqymlgdnvmvapvfteagdvqfylpegrwthlwhndeldgsrwhkqqhgflslp
    vyvrdntllalgnndqrpdyvwhegtafhlfnlqdgheavcevpaadgsviftlkaartg
    ntitvtgageaknwtlclrnvvkvnglqdgsqaeseqglvvkpqgnaltitlh