PDB entry 1xl3

View 1xl3 on RCSB PDB site
Description: Complex structure of Y.pestis virulence Factors YopN and TyeA
Class: cell invasion
Keywords: yopN, TyeA, Yersinia pestis, type III secretion
Deposited on 2004-09-30, released 2005-03-22
The last revision prior to the SCOP 1.73 freeze date was dated 2005-03-22, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: 0.195
AEROSPACI score: 0.38 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Secretion control protein
    Species: Yersinia pestis
    Gene: yopN, lcrE
    Database cross-references and differences (RAF-indexed):
    • GB AAC69792
      • modified residue (17)
      • modified residue (46)
      • modified residue (52)
      • modified residue (61)
      • modified residue (71)
      • modified residue (145)
      • modified residue (161)
      • modified residue (178)
      • modified residue (188)
      • modified residue (190)
      • modified residue (200)
    Domains in SCOP 1.73: d1xl3a1
  • Chain 'B':
    Compound: Secretion control protein
    Species: Yersinia pestis
    Gene: yopN, lcrE
    Database cross-references and differences (RAF-indexed):
    • GB AAC69792
      • modified residue (17)
      • modified residue (46)
      • modified residue (52)
      • modified residue (61)
      • modified residue (71)
      • modified residue (145)
      • modified residue (161)
      • modified residue (178)
      • modified residue (188)
      • modified residue (190)
      • modified residue (200)
    Domains in SCOP 1.73: d1xl3b1
  • Chain 'C':
    Compound: protein type A
    Species: Yersinia pestis
    Gene: tyeA
    Database cross-references and differences (RAF-indexed):
    • Uniprot P16161 (Start-91)
      • modified residue (17)
      • modified residue (40)
      • modified residue (48)
    Domains in SCOP 1.73: d1xl3c1
  • Chain 'D':
    Compound: protein type A
    Species: Yersinia pestis
    Gene: tyeA
    Database cross-references and differences (RAF-indexed):
    • Uniprot P16161
      • modified residue (17)
      • modified residue (40)
      • modified residue (48)
    Domains in SCOP 1.73: d1xl3d1
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1xl3A (A:)
sqarvsdveeqvnqylskvpeleqkqnvsellsllsnspnislsqlkaylegkseepseq
fkmlcglrdalkgrpelahlshlveqalvsmaeeqgetivlgaritpeayresqsgvnpl
qplrdtyrdavmgyqgiyaiwsdlqkrfpngdidsvilflqkalsadlqsqqsgsgrekl
givisdlqklkefgsvsdqvkgfwqffsegktngvrpf

    Sequence, based on observed residues (ATOM records): (download) 
    >1xl3A (A:)
arvsdveeqvnqylskvpeqnvsellsllsnspnislsqlkaylegkseepseqfkmlcg
lrdalkgrpelahlshlveqalvsmaeeqgetivlgaritpeayresqsgvnplqplrdt
yrdavmgyqgiyaiwsdlqkrfpngdidsvilflqkalsadlqsqqsgsgreklgivisd
lqklkefgsvsdqvkgfwqffs

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1xl3B (B:)
sqarvsdveeqvnqylskvpeleqkqnvsellsllsnspnislsqlkaylegkseepseq
fkmlcglrdalkgrpelahlshlveqalvsmaeeqgetivlgaritpeayresqsgvnpl
qplrdtyrdavmgyqgiyaiwsdlqkrfpngdidsvilflqkalsadlqsqqsgsgrekl
givisdlqklkefgsvsdqvkgfwqffsegktngvrpf

    Sequence, based on observed residues (ATOM records): (download) 
    >1xl3B (B:)
arvsdveeqvnqylskvpeleqkqnvsellsllsnspnislsqlkaylegkseepseqfk
mlcglrdalkgrpelahlshlveqalvsmaeeqgetivlgaritpeayresqsgvnplqp
lrdtyrdavmgyqgiyaiwsdlqkrfpngdidsvilflqkalsadlqsqqsgsgreklgi
visdlqklkefgsvsdqvkgfwqffs

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1xl3C (C:)
maydlsefmgdivalvdkrwagihdiehlanafslptpeikvrfyqdlkrmfrlfplgvf
sdeeqrqnllqmcqnaidmaieseeeelseld

    Sequence, based on observed residues (ATOM records): (download) 
    >1xl3C (C:)
aydlsefmgdivalvdkrwagihdiehlanafslptpeikvrfyqdlkrmfrlfplgvfs
deeqrqnllqmcqnaidmaieseeeelseld

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1xl3D (D:)
maydlsefmgdivalvdkrwagihdiehlanafslptpeikvrfyqdlkrmfrlfplgvf
sdeeqrqnllqmcqnaidmaieseeeelseld

    Sequence, based on observed residues (ATOM records): (download) 
    >1xl3D (D:)
aydlsefmgdivalvdkrwagihdiehlanafslptpeikvrfyqdlkrmfrlfplgvfs
deeqrqnllqmcqnaidmaieseee