PDB entry 1xhz

View 1xhz on RCSB PDB site
Description: Phi29 DNA polymerase, orthorhombic crystal form, ssDNA complex
Class: transferase/DNA
Keywords: DNA polymerase, protein-primed, strand displacement, processivity, replication
Deposited on 2004-09-21, released 2004-12-07
The last revision prior to the SCOP 1.73 freeze date was dated 2004-12-07, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: 0.219
AEROSPACI score: 0.26 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA polymerase
    Species: Bacteriophage phi-29
    Gene: 2
    Database cross-references and differences (RAF-indexed):
    • Uniprot P03680 (Start-574)
      • engineered (11)
      • engineered (65)
    Domains in SCOP 1.73: d1xhza1, d1xhza2
  • Chain 'B':
    Compound: DNA polymerase
    Species: Bacteriophage phi-29
    Gene: 2
    Database cross-references and differences (RAF-indexed):
    • Uniprot P03680 (Start-574)
      • engineered (11)
      • engineered (65)
  • Chain 'C':
    Compound: DNA polymerase
    Species: Bacteriophage phi-29
    Gene: 2
    Database cross-references and differences (RAF-indexed):
    • Uniprot P03680 (Start-574)
      • engineered (11)
      • engineered (65)
  • Chain 'D':
    Compound: DNA polymerase
    Species: Bacteriophage phi-29
    Gene: 2
    Database cross-references and differences (RAF-indexed):
    • Uniprot P03680 (Start-574)
      • engineered (11)
      • engineered (65)
  • Chain 'E':
    Compound: 5'-d(*tp*tp*tp*tp*t)-3'
  • Chain 'F':
    Compound: 5'-d(*tp*tp*tp*tp*t)-3'
  • Chain 'G':
    Compound: 5'-d(*tp*tp*tp*tp*t)-3'
  • Chain 'H':
    Compound: 5'-d(*tp*tp*tp*tp*t)-3'
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1xhzA (A:)
mkhmprkmyscafetttkvedcrvwaygymniedhseykignsldefmawvlkvqadlyf
hnlkfagafiinwlerngfkwsadglpntyntiisrmgqwymidiclgykgkrkihtviy
dslkklpfpvkkiakdfkltvlkgdidyhkerpvgykitpeeyayikndiqiiaealliq
fkqgldrmtagsdslkgfkdiittkkfkkvfptlslgldkevryayrggftwlndrfkek
eigegmvfdvnslypaqmysrllpygepivfegkyvwdedyplhiqhircefelkegyip
tiqikrsrfykgneylkssggeiadlwlsnvdlelmkehydlynveyisglkfkattglf
kdfidkwtyikttsegaikqlaklmlnslygkfasnpdvtgkvpylkengalgfrlgeee
tkdpvytpmgvfitawaryttitaaqacydriiycdtdsihltgteipdvikdivdpkkl
gywahestfkrakylrqktyiqdiymkevdgklvegspddytdikfsvkcagmtdkikke
vtfenfkvgfsrkmkpkpvqvpggvvlvddtftik

    Sequence, based on observed residues (ATOM records): (download) 
    >1xhzA (A:)
prkmyscafetttkvedcrvwaygymniedhseykignsldefmawvlkvqadlyfhnlk
fagafiinwlerngfkwsadglpntyntiisrmgqwymidiclgykgkrkihtviydslk
klpfpvkkiakdfkltvlkgdidyhkerpvgykitpeeyayikndiqiiaealliqfkqg
ldrmtagsdslkgfkdiittkkfkkvfptlslgldkevryayrggftwlndrfkekeige
gmvfdvnslypaqmysrllpygepivfegkyvwdedyplhiqhircefelkegyiptiqi
krsrfykgneylkssggeiadlwlsnvdlelmkehydlynveyisglkfkattglfkdfi
dkwtyikttsegaikqlaklmlnslygkfasnpdvtgkvpylkengalgfrlgeeetkdp
vytpmgvfitawaryttitaaqacydriiycdtdsihltgteipdvikdivdpkklgywa
hestfkrakylrqktyiqdiymkevdgklvegspddytdikfsvkcagmtdkikkevtfe
nfkvgfsrkmkpkpvqvpggvvlvddtftik

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.

  • Chain 'E':
    No sequence available.

  • Chain 'F':
    No sequence available.

  • Chain 'G':
    No sequence available.

  • Chain 'H':
    No sequence available.