PDB entry 1xb4

View 1xb4 on RCSB PDB site
Description: Crystal structure of subunit VPS25 of the endosomal trafficking complex ESCRT-II
Class: unknown function
Keywords: winged helix, UNKNOWN FUNCTION
Deposited on 2004-08-27, released 2005-03-22
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-10-11, with a file datestamp of 2017-10-06.
Experiment type: XRAY
Resolution: 3.1 Å
R-factor: N/A
AEROSPACI score: 0.12 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Hypothetical 23.6 kDa protein in YUH1-URA8 intergenic region
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: YJR102C, J1957
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1xb4a1, d1xb4a2
  • Chain 'B':
    Compound: Hypothetical 23.6 kDa protein in YUH1-URA8 intergenic region
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: YJR102C, J1957
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1xb4b1, d1xb4b2
  • Chain 'C':
    Compound: Hypothetical 23.6 kDa protein in YUH1-URA8 intergenic region
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: YJR102C, J1957
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1xb4c1, d1xb4c2
  • Chain 'D':
    Compound: Hypothetical 23.6 kDa protein in YUH1-URA8 intergenic region
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: YJR102C, J1957
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1xb4d1, d1xb4d2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1xb4A (A:)
msalppvysfpplytrqpnsltrrqqistwidiisqycktkkiwymsvdgtvindnelds
gstdnddskkisknlfnnediqrsvsqvfideiwsqmtkegkclpidqsgrrssnttttr
yfilwksldswaslilqwfedsgklnqvitlyelsegdetvnwefhrmpesllyyclkpl
cdrnratmlkdendkviaikvv

    Sequence, based on observed residues (ATOM records): (download) 
    >1xb4A (A:)
msalppvysfpplytrqpnsltrrqqistwidiisqycktkkiwymsvdgtvindknlfn
nediqrsvsqvfideiwsqmtkegkclpidqsgrrsttttryfilwksldswaslilqwf
edsgklnqvitlyelsdetvnwefhrmpesllyyclkplcdrnratmlkdendkviaikv

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1xb4B (B:)
msalppvysfpplytrqpnsltrrqqistwidiisqycktkkiwymsvdgtvindnelds
gstdnddskkisknlfnnediqrsvsqvfideiwsqmtkegkclpidqsgrrssnttttr
yfilwksldswaslilqwfedsgklnqvitlyelsegdetvnwefhrmpesllyyclkpl
cdrnratmlkdendkviaikvv

    Sequence, based on observed residues (ATOM records): (download) 
    >1xb4B (B:)
msalppvysfpplytrqpnsltrrqqistwidiisqycktkkiwymsvdgtvnlfnnedi
qrsvsqvfideiwsqmtkegkclpidqsgrrssnttttryfilwksldswaslilqwfed
sgklnqvitlyelseetvnwefhrmpesllyyclkplcdrnratmlkdendkviaikvv

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1xb4C (C:)
msalppvysfpplytrqpnsltrrqqistwidiisqycktkkiwymsvdgtvindnelds
gstdnddskkisknlfnnediqrsvsqvfideiwsqmtkegkclpidqsgrrssnttttr
yfilwksldswaslilqwfedsgklnqvitlyelsegdetvnwefhrmpesllyyclkpl
cdrnratmlkdendkviaikvv

    Sequence, based on observed residues (ATOM records): (download) 
    >1xb4C (C:)
alppvysfpplytrqpnsltrrqqistwidiisqycktkkiwymsvdgtvindnknlfnn
ediqrsvsqvfideiwsqmtkegkclpidqsgrrssnttttryfilwksldswaslilqw
fedsgklnqvitlyelsetvnwefhrmpesllyyclkplcdrnratmlkdendkviaikv

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1xb4D (D:)
msalppvysfpplytrqpnsltrrqqistwidiisqycktkkiwymsvdgtvindnelds
gstdnddskkisknlfnnediqrsvsqvfideiwsqmtkegkclpidqsgrrssnttttr
yfilwksldswaslilqwfedsgklnqvitlyelsegdetvnwefhrmpesllyyclkpl
cdrnratmlkdendkviaikvv

    Sequence, based on observed residues (ATOM records): (download) 
    >1xb4D (D:)
salppvysfpplytrqptrrqqistwidiisqycktkkiwymsvdgtvinnlfnnediqr
svsqvfideiwsqmtkegkclpiyfilwksldswaslilqwfgklnqvitlyelsvnwef
hrmpesllyyclkplcdrntmlkdendkviaikv